RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 ZHX3Q9H4I2 956 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 USP29Q9HBJ7 922 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 PCDHGA8Q9Y5G5 932 aa13.59□□□□□ -0.23
TNFSF11-201ENST00000239849 CLEC18AA5D8T8 446 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 FAM47DPA6NHR8 397 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 TISP43B9A030 160 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 WNT1P04628 370 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 ITGB6P18564 788 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 CCR5P51681 352 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 CACNA2D1P54289 1103 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 NFKB2Q00653 900 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 BNIP3Q12983 259 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 LINC00303Q3SY05 128 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 FNDC3BQ53EP0 1204 aaKnown RBP13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 CLEC18BQ6UXF7 455 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 Q6ZNB5 142 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 CLEC18CQ8NCF0 446 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 B3GALNT2Q8NCR0 500 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 GANCQ8TET4 914 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 DCLK3Q9C098 648 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 LRRC4CQ9HCJ2 640 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 ATXN7L1Q9ULK2 861 aaPredicted RBP13.58□□□□□ -0.24
TNFSF11-201ENST00000239849 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 A0A1W2PR77 199 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 CYP26A1O43174 497 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 ALPPL2P10696 532 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 DUSP3P51452 185 aaPredicted RBP13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SURF1Q15526 300 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 ME3Q16798 604 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 IQCHQ86VS3 1027 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 MFSD2AQ8NA29 543 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 RBBP8NLQ8NC74 664 aaPredicted RBP13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SMARCD1Q96GM5 515 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SERAC1Q96JX3 654 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 CDK5RAP1Q96SZ6 601 aaKnown RBP13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 KCNK16Q96T55 309 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 SATB2Q9UPW6 733 aa13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 ANKRD17O75179 2603 aaKnown RBP13.57□□□□□ -0.24
TNFSF11-201ENST00000239849 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 A8MXQ7 604 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 JAK2O60674 1132 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 CKMT1AP12532 417 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 GARTP22102 1010 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 NUDT1P36639 197 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 GALCP54803 685 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 TNNC1P63316 161 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 CLN3Q13286 438 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 DUOXA2Q1HG44 320 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 C3orf38Q5JPI3 329 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 OR4C6Q8NH72 309 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 LIN37Q96GY3 246 aaPredicted RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 FIZ1Q96SL8 496 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 B3GNT5Q9BYG0 378 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 GZF1Q9H116 711 aaPredicted RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 SLC25A18Q9H1K4 315 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 PABPC3Q9H361 631 aaKnown RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 FBXL12Q9NXK8 326 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 MYLKQ15746 1914 aa13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
TNFSF11-201ENST00000239849 CDRT15L2A8MXV6 281 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 TBX18O95935 607 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 COG7P83436 770 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 ISXQ2M1V0 245 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 TMEM119Q4V9L6 283 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 NCEH1Q6PIU2 408 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 SORCS1Q8WY21 1168 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 EXTL1Q92935 676 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 PLIN2Q99541 437 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 MRPL45Q9BRJ2 306 aaKnown RBP13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 PRSS16Q9NQE7 514 aa13.55□□□□□ -0.24
TNFSF11-201ENST00000239849 CLDN5O00501 218 aa13.54□□□□□ -0.24
TNFSF11-201ENST00000239849 TRIM38O00635 465 aa13.54□□□□□ -0.24
TNFSF11-201ENST00000239849 KIAA0391O15091 583 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms