RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ATP6V1G2O95670 118 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 FAM200BP0CF97 657 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 TROVE2P10155 538 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 NDUFV1P49821 464 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 SERPINB9P50453 376 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PDK1Q15118 436 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 TIFABQ6ZNK6 161 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 SIX6OS1Q8N1H7 587 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PTPRN2Q92932 1015 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 OXNAD1Q96HP4 312 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 CRTAC1Q9NQ79 661 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 MFHAS1Q9Y4C4 1052 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 M0QYT0 321 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 COPEO14579 308 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 DUSP11O75319 330 aaKnown RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 FYNP06241 537 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 AKR1A1P14550 325 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 ACAT1P24752 427 aaKnown RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 TKTL1P51854 596 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 SCAPQ12770 1279 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 DPYSQ14117 519 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 NBPF20Q3BBV1 942 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PLEKHG4Q58EX7 1191 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 LRRC8BQ6P9F7 803 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 CCNJLQ8IV13 435 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 ERP27Q96DN0 273 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PGAP3Q96FM1 320 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 LGMNQ99538 433 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 FERMT1Q9BQL6 677 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 C12orf65Q9H3J6 166 aaKnown RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 DDX43Q9NXZ2 648 aaKnown RBP16.69■□□□□ 0.26
UBE3D-201ENST00000237186 ST3GAL5Q9UNP4 418 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 PLLPQ9Y342 182 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 TRPV2Q9Y5S1 764 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 RAD54BQ9Y620 910 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 DCLK1O15075 740 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 MFSD11O43934 449 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 STK10O94804 968 aaKnown RBP16.68■□□□□ 0.26
UBE3D-201ENST00000237186 SLC10A3P09131 477 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 CNTFP26441 200 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 GRIA1P42261 906 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 SERPINB4P48594 390 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 HCAR3P49019 387 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 DAOAP59103 153 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 DEUP1Q05D60 604 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 PARP6Q2NL67 630 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 RPAINQ86UA6 219 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 MPP5Q8N3R9 675 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 P2RY11Q96G91 374 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
UBE3D-201ENST00000237186 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-201ENST00000237186 LRMDAQ9H2I8 198 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 NOD2Q9HC29 1040 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 PTCH2Q9Y6C5 1203 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 CDY2AQ9Y6F7 541 aa16.68■□□□□ 0.26
UBE3D-201ENST00000237186 WDR91A4D1P6 747 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TRAFD1O14545 582 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 NRP1O14786 923 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 THP07101 528 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SLC8A1P32418 973 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 ADRA1BP35368 520 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SEMA3BQ13214 749 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TRMT10BQ6PF06 316 aaKnown RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 RFX8Q6ZV50 586 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 INPP5DQ92835 1189 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TMEM237Q96Q45 408 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SMOQ99835 787 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SYT15Q9BQS2 421 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 MED10Q9BTT4 135 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 TSSK1BQ9BXA7 367 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 RRN3Q9NYV6 651 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 MAD1L1Q9Y6D9 718 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 HMX2A2RU54 273 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 SDR42E2A6NKP2 422 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 M0QZ92 97 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 PPP1R12AO14974 1030 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 CSH1P0DML2 217 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 CSH2P0DML3 217 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 T-ENOLP0DO92 83 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
UBE3D-201ENST00000237186 WASHC5Q12768 1159 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
UBE3D-201ENST00000237186 HFE2Q6ZVN8 426 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms