RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KBTBD6Q86V97 674 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 UNC5BQ8IZJ1 945 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 SMYD1Q8NB12 490 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 ADAM32Q8TC27 787 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 LZICQ8WZA0 190 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 HSPH1Q92598 858 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 NKD2Q969F2 451 aaPredicted RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 MSTO1Q9BUK6 570 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 OXCT2Q9BYC2 517 aaPredicted RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 VPS33BQ9H267 617 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 TIMMDC1Q9NPL8 285 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 TJP2Q9UDY2 1190 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 ZNF214Q9UL59 606 aaPredicted RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 DRG1Q9Y295 367 aaKnown RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 E9PBE3 544 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 F5H423 210 aaPredicted RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 AIM2O14862 343 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 AP1G1O43747 822 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 KLHL41O60662 606 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 FGFR3P22607 806 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 NAMPTP43490 491 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 CDHR1Q96JP9 859 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 DHX33Q9H6R0 707 aaKnown RBP14.53□□□□□ -0.08
SF1-201ENST00000227503 PCDH18Q9HCL0 1135 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 FBXO40Q9UH90 709 aa14.53□□□□□ -0.08
SF1-201ENST00000227503 K7ERI5 159 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 KLF11O14901 512 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 CFLARO15519 480 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 ITGBL1O95965 494 aaPredicted RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 TCN1P20061 433 aaPredicted RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 IL1R2P27930 398 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 CD97P48960 835 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 BACE1P56817 501 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 CD300CQ08708 224 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 FASTKD1Q53R41 847 aaKnown RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 PPM1LQ5SGD2 360 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 LRRC38Q5VT99 294 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 TTC39BQ5VTQ0 682 aaPredicted RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 FBXW8Q8N3Y1 598 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 FAM156AQ8NDB6 213 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 GSDMBQ8TAX9 411 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 BTBD9Q96Q07 612 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 SLX1AQ9BQ83 275 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 APOBEC2Q9Y235 224 aaKnown RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 MAFBQ9Y5Q3 323 aaPredicted RBP14.52□□□□□ -0.08
SF1-201ENST00000227503 RLFQ13129 1914 aa14.52□□□□□ -0.08
SF1-201ENST00000227503 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 E7ESA3 106 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 ADCY6O43306 1168 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 LDHAP00338 332 aaKnown RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 BPGMP07738 259 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 THRAP10827 490 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 SEZ6Q53EL9 994 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 PDPK2PQ6A1A2 396 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 PATL1Q86TB9 770 aaKnown RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 CCDC33Q8N5R6 958 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 DEPTORQ8TB45 409 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 ACTRT2Q8TDY3 377 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 PGBD4Q96DM1 585 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 LRGUKQ96M69 825 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 PDGFDQ9GZP0 370 aaPredicted RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 SEMA6AQ9H2E6 1030 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 FAIMQ9NVQ4 179 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 TTLL3Q9Y4R7 772 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 SIP14410 1827 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 STX16-NPEPL1H3BU86 382 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 DENRO43583 198 aaKnown RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 SNNO75324 88 aaPredicted RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 CST3P01034 146 aaPredicted RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 FAM58BPP0C7Q3 252 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 ALOX15P16050 662 aaPredicted RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 PTPN1P18031 435 aaKnown RBP14.52□□□□□ -0.09
SF1-201ENST00000227503 PTPN7P35236 360 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 TMEM132BQ14DG7 1078 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 HSP90AA5PQ58FG0 334 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 LPCAT2Q7L5N7 544 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 SLC26A11Q86WA9 606 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 ADGRF2Q8IZF7 708 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 CCT7Q99832 543 aa14.52□□□□□ -0.09
SF1-201ENST00000227503 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
SF1-201ENST00000227503 ARHGAP10A1A4S6 786 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 HMX2A2RU54 273 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 CASQ2O14958 399 aaPredicted RBP14.51□□□□□ -0.09
SF1-201ENST00000227503 ZBTB14O43829 449 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 FBXO21O94952 628 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 SNRPAP09012 282 aaKnown RBP14.51□□□□□ -0.09
SF1-201ENST00000227503 DPEP1P16444 411 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 SERPINB5P36952 375 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 OAZ1P54368 228 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 GSTM4Q03013 218 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 TNFAIP1Q13829 316 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 GRAMD4Q6IC98 578 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 ELMSAN1Q6PJG2 1045 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 EMC1Q8N766 993 aa14.51□□□□□ -0.09
SF1-201ENST00000227503 TRIML2Q8N7C3 387 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms