RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 RTP3Q9BQQ7 232 aa8.25□□□□□ -1.09
HMGXB4-201ENST00000216106 PLAC1Q9HBJ0 212 aa8.25□□□□□ -1.09
HMGXB4-201ENST00000216106 RCOR3Q9P2K3 495 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-201ENST00000216106 MAD1L1Q9Y6D9 718 aa8.25□□□□□ -1.09
HMGXB4-201ENST00000216106 EEF2KO00418 725 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 HGSO14964 777 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CPP00450 1065 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PCSK1P29120 753 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RPL9P32969 192 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SCTRP47872 440 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ANKRD20A3Q5VUR7 823 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RFX8Q6ZV50 586 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RPAINQ86UA6 219 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PSTKQ8IV42 348 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PPM1NQ8N819 430 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CCNYQ8ND76 341 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SLC44A1Q8WWI5 657 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 FRMD8Q9BZ67 464 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PITPNM3Q9BZ71 974 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 WDR6Q9NNW5 1121 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SLCO1B3Q9NPD5 702 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CNGB3Q9NQW8 809 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PIH1D1Q9NWS0 290 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 DDIT4Q9NX09 232 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CASP8AP2Q9UKL3 1982 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CXorf49A8MYA2 514 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 HHLA1C9JL84 531 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SPAG6O75602 509 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SUN1O94901 812 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 FBXO21O94952 628 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 LTFP02788 710 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ITGB1P05556 798 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 BDNFP23560 247 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ADRA1DP25100 572 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SLC18A1P54219 525 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 MTFR1Q15390 333 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 TTC31Q49AM3 519 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RAB41Q5JT25 222 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 HHATQ5VTY9 493 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 P2RY11Q96G91 374 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 TMEM209Q96SK2 561 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ACTR5Q9H9F9 607 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SHROOM3Q8TF72 1996 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 THSD7BQ9C0I4 1608 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 A0A0U1RQF3 1178 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 IQANK1A0A1B0GTG1 560 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 WDR91A4D1P6 747 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RNF103O00237 685 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 ZNF623O75123 536 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 C1QAP02745 245 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 MAGEA3P43357 314 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 RAB27AP51159 221 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PDK4Q16654 411 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 FAM133BQ5BKY9 247 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 CCSAPQ6IQ19 270 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 COLGALT1Q8NBJ5 622 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 MCUQ8NE86 351 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 KLHDC9Q8NEP7 349 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 TCP10LQ8TDR4 215 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SERAC1Q96JX3 654 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 SPATA13Q96N96 652 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PRDM12Q9H4Q4 367 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 TMLHEQ9NVH6 421 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
HMGXB4-201ENST00000216106 NUP205Q92621 2012 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TMEM88BA6NKF7 163 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 HACD1B0YJ81 288 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 CAPN15O75808 1086 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TOMM70O94826 608 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 ZWINTO95229 277 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 MT-ND3P03897 115 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TPSB2P20231 275 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 ADRA1BP35368 520 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 CRADDP78560 199 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SEMA5AQ13591 1074 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 DPYSQ14117 519 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TPSAB1Q15661 275 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SEPT7Q16181 437 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 LACTB2Q53H82 288 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 C4orf22Q6V702 233 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 BZW1Q7L1Q6 419 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 BHLHA9Q7RTU4 235 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 CCDC63Q8NA47 563 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 LRRC8CQ8TDW0 803 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 SMYD2Q9NRG4 433 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.23□□□□□ -1.094e-6■■■■□ 21.4
HMGXB4-201ENST00000216106 SLC17A7Q9P2U7 560 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 UGT1A9O60656 530 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 IFRD2Q12894 506 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 GRIK3Q13003 919 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 ITGA7Q13683 1181 aa8.23□□□□□ -1.09
HMGXB4-201ENST00000216106 DSC3Q14574 896 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms