RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Olfr675A0A1B0GSE1 317 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 IapP03975 557 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Enpp1P06802 906 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Coq10bQ3THF9 240 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Nol9Q3TZX8 714 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 PicalmQ7M6Y3 660 aaKnown RBP17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Lurap1lQ8K2P1 221 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Atp6v1b1Q91YH6 513 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dhrs7bQ99J47 323 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Pacsin3Q99JB8 424 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ttc25Q9D4B2 624 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 ParvbQ9ES46 365 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ptk2bQ9QVP9 1009 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 PignQ9R1S3 931 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Kcnd2Q9Z0V2 630 aa17.36■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sh2d4bA6X942 431 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Axdnd1Q3UZ57 424 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sarm1Q6PDS3 724 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Enpp4Q8BTJ4 456 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dhx32Q8BZS9 744 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ephb1Q8CBF3 984 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sh3kbp1Q8R550 709 aaKnown RBP17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 FtcdQ91XD4 541 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Hmgn3Q9DCB1 99 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Magel2Q9QZ04 1284 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gyg1Q9R062 333 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sucla2Q9Z2I9 463 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tldc2A2ACG1 198 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 EpoP07321 192 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 CtshP49935 333 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rpl10aP53026 217 aaKnown RBP17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Abce1P61222 599 aaKnown RBP17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Gprasp2Q8BUY8 826 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 ClmnQ8C5W0 1052 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Nr3c2Q8VII8 978 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trpv6Q91WD2 767 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 ChiaQ91XA9 473 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Adad2Q9D5P4 478 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Abhd12bG3UZN6 359 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Pabpc4lG5E8X2 370 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 IkbkgO88522 412 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Hace1Q3U0D9 909 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 FcgrtQ61559 365 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ttc8Q8VD72 515 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rnf31Q924T7 1066 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Znf704Q9ERQ3 566 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Kdelc1Q9JHP7 502 aa17.35■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Arhgef26D3YYY8 869 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 JhyE9Q793 770 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tnfrsf11bO08712 401 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 PkmP52480 531 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sult1d1Q3UZZ6 295 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ip6k2Q80V72 448 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Plin5Q8BVZ1 463 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Adcy4Q91WF3 1077 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Catsper1Q91ZR5 686 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mrps18aQ99N85 196 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Stk19Q9JHN8 254 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mocs3A2BDX3 460 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Olfr611K7N609 323 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Olfr612L7N462 323 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 InhbeO08717 350 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 KlO35082 1014 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Bcat1P24288 386 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ptpn1P35821 432 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 LmnaP48678 665 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Paqr6Q6TCG5 343 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 WtipQ7TQJ8 398 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trim32Q8CH72 655 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 PlvapQ91VC4 438 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Tssk3Q9D2E1 268 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Q9D2Q3 444 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Atp8b4A2ANX3 1194 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Hcn2O88703 863 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 P01734 135 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Prkg1P0C605 671 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 CcnfP51944 777 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 St14P56677 855 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rab6bP61294 208 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Dok7Q18PE0 504 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Cd300lgQ1ERP8 331 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Trim71Q1PSW8 855 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 RetsatQ64FW2 609 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mpp4Q6P7F1 635 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Prpf31Q8CCF0 499 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Q8CD60 292 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Smg8Q8VE18 991 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Mtif2Q91YJ5 727 aaKnown RBP17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 HlcsQ920N2 722 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Sntg2Q925E0 539 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Aldh18a1Q9Z110 795 aa17.34■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Vmn2r84D3YWE3 849 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Hmgxb3G3X9M3 1254 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Stt3aP46978 705 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 9130409I23RikQ3TS87 320 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Ankrd13bQ5F259 626 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rprd1aQ8VDS4 312 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 MyocdQ8VIM5 935 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Smap1Q91VZ6 440 aa17.33■□□□□ 0.37
Ctcf-201ENSMUST00000005841 Rsl24d1Q99L28 163 aa17.33■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms