RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ANKS3Q6ZW76 656 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 CDKL3Q8IVW4 592 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-216ENST00000641375 PPIL6Q8IXY8 311 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ARMC5Q96C12 935 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 RTP4Q96DX8 246 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 ATP6V1G3Q96LB4 118 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 FBXO44Q9H4M3 255 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 WDCPQ9H6R7 721 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 C10orf88Q9H8K7 445 aa17.04■□□□□ 0.32
PHGDH-216ENST00000641375 CXCR3P49682 368 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 GYS2P54840 703 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 EXOC4Q96A65 974 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 RBM15Q96T37 977 aaKnown RBP eCLIP17.03■□□□□ 0.324e-7■■■□□ 17.3
PHGDH-216ENST00000641375 MAGEB5Q9BZ81 275 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 ARHGEF4Q9NR80 690 aa17.03■□□□□ 0.32
PHGDH-216ENST00000641375 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-216ENST00000641375 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-216ENST00000641375 UPP2O95045 317 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 TTC4O95801 387 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 AMPD1P23109 780 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 PKN2Q16513 984 aaKnown RBP17.02■□□□□ 0.32
PHGDH-216ENST00000641375 KRT71Q3SY84 523 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 NCBP2-AS2Q69YL0 99 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 C4orf22Q6V702 233 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
PHGDH-216ENST00000641375 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 USP29Q9HBJ7 922 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 HCSTQ9UBK5 93 aa17.02■□□□□ 0.32
PHGDH-216ENST00000641375 NT5C1B-RDH14C9J2C7 533 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.31
PHGDH-216ENST00000641375 KCNN4O15554 427 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 CREB3O43889 395 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 DGKIO75912 1065 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 CPB1P15086 417 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 HCAR3P49019 387 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 IFRD2Q12894 506 aaPredicted RBP17.02■□□□□ 0.31
PHGDH-216ENST00000641375 GPR17Q13304 367 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 DQX1Q8TE96 717 aaKnown RBP17.02■□□□□ 0.31
PHGDH-216ENST00000641375 PRCCQ92733 491 aaPredicted RBP17.02■□□□□ 0.31
PHGDH-216ENST00000641375 CENPHQ9H3R5 247 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 C11orf49Q9H6J7 331 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 PAK5Q9P286 719 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 SCML2Q9UQR0 700 aa17.02■□□□□ 0.31
PHGDH-216ENST00000641375 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 GBE1Q04446 702 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 KCTD16Q68DU8 428 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 RFX8Q6ZV50 586 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TAC4Q86UU9 113 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 MON1AQ86VX9 555 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 ARHGAP18Q8N392 663 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 C2orf15Q8WU43 125 aaKnown RBP17.01■□□□□ 0.31
PHGDH-216ENST00000641375 CPT1BQ92523 772 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 PGLYRP2Q96PD5 576 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TMEM109Q9BVC6 243 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TMPRSS4Q9NRS4 437 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 DTLQ9NZJ0 730 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 ZNF638Q14966 1978 aaKnown RBP17.01■□□□□ 0.31
PHGDH-216ENST00000641375 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 LTBP2Q14767 1821 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 ABHD14A-ACY1A0A1B0GW23 586 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TBC1D4O60343 1298 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 IGLV3-25P01717 112 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 SHBGP04278 402 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 RBL1P28749 1068 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 SEMA3BQ13214 749 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 RTP2Q5QGT7 225 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 AGBL2Q5U5Z8 902 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 CENPUQ71F23 418 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 PDZD4Q76G19 769 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-216ENST00000641375 RNF34Q969K3 372 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 B3GALT6Q96L58 329 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TTC25Q96NG3 672 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 FERMT1Q9BQL6 677 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 TKTL2Q9H0I9 626 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 SMOC2Q9H3U7 446 aa17.01■□□□□ 0.31
PHGDH-216ENST00000641375 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 ACSL3O95573 720 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 PBX3P40426 434 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 MAGEA4P43358 317 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 SLC10A2Q12908 348 aaPredicted RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 DPYSQ14117 519 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 DDR2Q16832 855 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 KCNT2Q6UVM3 1135 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 TMEM173Q86WV6 379 aaPredicted RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 NAT8LQ8N9F0 302 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 ATAD1Q8NBU5 361 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 PAWRQ96IZ0 340 aaKnown RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 PWWP2AQ96N64 755 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 OLFM3Q96PB7 478 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.31
PHGDH-216ENST00000641375 EPAS1Q99814 870 aa17■□□□□ 0.31
PHGDH-216ENST00000641375 ROPN1BQ9BZX4 212 aaPredicted RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 ROPN1Q9HAT0 212 aaPredicted RBP17■□□□□ 0.31
PHGDH-216ENST00000641375 DNAJC17Q9NVM6 304 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms