RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RXFP3Q9NSD7 469 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 CACNA2D2Q9NY47 1150 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 SLC27A6Q9Y2P4 619 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 HBS1LQ9Y450 684 aaKnown RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 ADRB1P08588 477 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 CISD3P0C7P0 127 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 GABRG2P18507 467 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 RGS7P49802 495 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 GCNT1Q02742 428 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 CNGA2Q16280 664 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 MAP7D1Q3KQU3 841 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 FYB2Q5VWT5 728 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 BSPRYQ5W0U4 402 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 RRAGAQ7L523 313 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 CREBRFQ8IUR6 639 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 TRIML1Q8N9V2 468 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 NDRG1Q92597 394 aaKnown RBP18.73■□□□□ 0.59
PNKP-225ENST00000636214 ERLEC1Q96DZ1 483 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 ACOX2Q99424 681 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 GABRG3Q99928 467 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 SRRTQ9BXP5 876 aaKnown RBP18.73■□□□□ 0.59
PNKP-225ENST00000636214 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■□ 21.1
PNKP-225ENST00000636214 ACACBO00763 2458 aa18.73■□□□□ 0.59
PNKP-225ENST00000636214 LAMA1P25391 3075 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 SYNCRIPO60506 623 aaKnown RBP18.72■□□□□ 0.59
PNKP-225ENST00000636214 FBXO21O94952 628 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 KRT5P13647 590 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 BMP6P22004 513 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 BRD2P25440 801 aaKnown RBP18.72■□□□□ 0.59
PNKP-225ENST00000636214 LMAN2Q12907 356 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 MPPE1Q53F39 396 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 KIAA1324Q6UXG2 1013 aaKnown RBP18.72■□□□□ 0.59
PNKP-225ENST00000636214 SYT12Q8IV01 421 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 SCML4Q8N228 414 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 EHBP1Q8NDI1 1231 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 HSFY1Q96LI6 401 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 SLC2A11Q9BYW1 496 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 CIPCQ9C0C6 399 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 TMEM9BQ9NQ34 198 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 SFMBT1Q9UHJ3 866 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 FBXO10Q9UK96 956 aa18.72■□□□□ 0.59
PNKP-225ENST00000636214 A0A1W2PQF6 199 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 LNP1A1A4G5 178 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 YJEFN3A6XGL0 299 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 C4orf47A7E2U8 309 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 E7ENQ6 273 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 NDUFS2O75306 463 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 LATS1O95835 1130 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 NDUFV2P19404 249 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 MFAP3P55082 362 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 DAOAP59103 153 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 UBE2HP62256 183 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 EIF4HQ15056 248 aaKnown RBP18.71■□□□□ 0.59
PNKP-225ENST00000636214 TRIP4Q15650 581 aaPredicted RBP18.71■□□□□ 0.59
PNKP-225ENST00000636214 TRIM61Q5EBN2 209 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 RABEPKQ7Z6M1 372 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 TFAP2BQ92481 460 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 KAT5Q92993 513 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 INTS2Q9H0H0 1204 aaKnown RBP18.71■□□□□ 0.59
PNKP-225ENST00000636214 ST7Q9NRC1 585 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 MBD1Q9UIS9 605 aaPredicted RBP18.71■□□□□ 0.59
PNKP-225ENST00000636214 HCN2Q9UL51 889 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 CYP8B1Q9UNU6 501 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 RAD54BQ9Y620 910 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 STON1Q9Y6Q2 735 aa18.71■□□□□ 0.59
PNKP-225ENST00000636214 CEP192Q8TEP8 1941 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 PIK3R2O00459 728 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 SART1O43290 800 aaKnown RBP18.7■□□□□ 0.58
PNKP-225ENST00000636214 MED7O43513 233 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 LTFP02788 710 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 PTGER3P43115 390 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 ATXN3P54252 364 aaPredicted RBP18.7■□□□□ 0.58
PNKP-225ENST00000636214 MARSP56192 900 aaKnown RBP18.7■□□□□ 0.58
PNKP-225ENST00000636214 PKDCCQ504Y2 493 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 NUGGCQ68CJ6 796 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 KIAA1211LQ6NV74 962 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 PMF1Q6P1K2 205 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 BHLHA9Q7RTU4 235 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 ARHGEF19Q8IW93 802 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 UNC45BQ8IWX7 931 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 FRMD1Q8N878 549 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 SLC35F5Q8WV83 523 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
PNKP-225ENST00000636214 LSM14BQ9BX40 385 aaKnown RBP18.7■□□□□ 0.58
PNKP-225ENST00000636214 EVLQ9UI08 416 aaPredicted RBP18.7■□□□□ 0.58
PNKP-225ENST00000636214 TYW5A2RUC4 315 aaKnown RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 PATE3B3GLJ2 98 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 MSI1O43347 362 aaKnown RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 TSPAN3O60637 253 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 CFIP05156 583 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 HOXD12P35452 270 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 SLC11A2P49281 568 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 ZNF132P52740 706 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 CAMK4Q16566 473 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 TPD52L1Q16890 204 aaPredicted RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 GEN1Q17RS7 908 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 ADGRF1Q5T601 910 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 FAM217AQ8IXS0 508 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms