RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ZNF189O75820 626 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 IL33O95760 270 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NCAM1P13591 858 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 LCP1P13796 627 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NPR3P17342 541 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PCSK1P29120 753 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 RENBPP51606 427 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 DAB2P98082 770 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 DPYSL3Q14195 570 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NOMO1Q15155 1222 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 SKIDA1Q1XH10 827 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 FAM26DQ5JW98 314 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 WSCD1Q658N2 575 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 DARS2Q6PI48 645 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PPP1R21Q6ZMI0 780 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 BZW1Q7L1Q6 419 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 OSTM1Q86WC4 334 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 RASSF3Q86WH2 238 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 METTL23Q86XA0 190 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 HLA-CQ95604 372 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 TRMT2BQ96GJ1 504 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 UROC1Q96N76 676 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PEBP4Q96S96 227 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 RBM15Q96T37 977 aaKnown RBP eCLIP7.43□□□□□ -1.225e-8■■■■■ 32.9
BRCA1-230ENST00000634433 GAD1Q99259 594 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 TMEM121Q9BTD3 319 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 EPN3Q9H201 632 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ADAM7Q9H2U9 754 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 LRRC4Q9HBW1 653 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NINJ2Q9NZG7 142 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 DSEQ9UL01 958 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CDH9Q9ULB4 789 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PADI3Q9ULW8 664 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NME7Q9Y5B8 376 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 A0A087WUV0 522 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ARL5CA6NH57 179 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ACSL3O95573 720 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 GNRH1P01148 92 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 CD48P09326 243 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 LSP1P33241 339 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 MLH1P40692 756 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 MATKP42679 507 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 NR2C2P49116 596 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 HNRNPH2P55795 449 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ARL4CP56559 192 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 HSD17B7P56937 341 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 BCAR1P56945 870 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 KYNUQ16719 465 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 KCTD19Q17RG1 926 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 RNASEH2BQ5TBB1 312 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SIX6OS1Q8N1H7 587 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PPHLN1Q8NEY8 458 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 BCAS4Q8TDM0 211 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ZFPM2Q8WW38 1151 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 FRMD8Q9BZ67 464 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PCDH18Q9HCL0 1135 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 DDX43Q9NXZ2 648 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SRRDQ9UH36 339 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 STAP1Q9ULZ2 295 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PTCH2Q9Y6C5 1203 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 A0A0U1RQF3 1178 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 H7C0C1 242 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 DLL1O00548 723 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ALOX15BO15296 676 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 DAB1O75553 588 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ZSCAN5DPP0CG00 497 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ODC1P11926 461 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 TSHRP16473 764 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 CCND3P30281 292 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ATP5OP48047 213 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 MRPS5P82675 430 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ITGA7Q13683 1181 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 AUHQ13825 339 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 DSC3Q14574 896 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 TAF5Q15542 800 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SLC25A52Q3SY17 297 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ANKRD20A8PQ5CZ79 823 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 ZNF618Q5T7W0 954 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 TRNP1Q6NT89 227 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 AGMOQ6ZNB7 445 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 CYP4V2Q6ZWL3 525 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 B4GALNT4Q76KP1 1039 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PIGZQ86VD9 579 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SPATS2Q86XZ4 545 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 FUKQ8N0W3 1084 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PIWIL1Q96J94 861 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SYT15Q9BQS2 421 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SNRNP25Q9BV90 132 aaKnown RBP7.42□□□□□ -1.22
BRCA1-230ENST00000634433 B3GNT5Q9BYG0 378 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 SAYSD1Q9NPB0 183 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 RRN3Q9NYV6 651 aa7.42□□□□□ -1.22
BRCA1-230ENST00000634433 PAK5Q9P286 719 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms