RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EBF3Q9H4W6 596 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 TBC1D17Q9HA65 648 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 NMUR1Q9HB89 426 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 ABCC13Q9NSE7 274 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 CLIC5Q9NZA1 410 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 IL37Q9NZH6 218 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 TBC1D14Q9P2M4 693 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 NDRG2Q9UN36 371 aaKnown RBP7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
NPLOC4-221ENST00000625705 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM92AA1XBS5 289 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 YJEFN3A6XGL0 299 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 E7ENQ6 273 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 MAN2B1O00754 1011 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 NCAM2O15394 837 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 LSM8O95777 96 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 TBX18O95935 607 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 NCAM1P13591 858 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ARSAP15289 507 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 RHOQP17081 205 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 GPD2P43304 727 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 DAOAP59103 153 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ZNF445P59923 1031 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 COG7P83436 770 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 TNK2Q07912 1038 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 RUNX3Q13761 415 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ANO4Q32M45 955 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 SFMBT2Q5VUG0 894 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 SNX30Q5VWJ9 437 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 TRIM68Q6AZZ1 485 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ZNF852Q6ZMS4 543 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 TRIM72Q6ZMU5 477 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 APTXQ7Z2E3 356 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 PRICKLE2Q7Z3G6 844 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 NOP9Q86U38 636 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ERICH1Q86X53 443 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 ZNF677Q86XU0 584 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 FBXL6Q8N531 539 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 CLEC4CQ8WTT0 213 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 STK32AQ8WU08 396 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 SLC20A1Q8WUM9 679 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 OSCP1Q8WVF1 389 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM3CQ92520 227 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 MSANTD3Q96H12 275 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 NAP1L5Q96NT1 182 aaPredicted RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 XPO4Q9C0E2 1151 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 LHX5Q9H2C1 402 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 C8orf33Q9H7E9 229 aaPredicted RBP7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM204AQ9H8W3 233 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 OSER1Q9NX31 292 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
NPLOC4-221ENST00000625705 SYNJ2BP-COX16A0A087WUM0 186 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 KANSL1LA0AUZ9 987 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 LRRC53A6NM62 1247 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 SPECC1L-ADORA2AF8WAN1 911 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 GOLGA8SH3BPF8 625 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 MEN1O00255 615 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 MSI1O43347 362 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 GPR37L1O60883 481 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 GRAP2O75791 330 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 OLFM2O95897 454 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 PDGFBP01127 241 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 ERBB2P04626 1255 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 CYBBP04839 570 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 ZDHHC11BP0C7U3 371 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 DESP17661 470 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 TNFAIP3P21580 790 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 CD72P21854 359 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 CORO1AP31146 461 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 NSFP46459 744 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 SOX9P48436 509 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 HARS2P49590 506 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 PGFP49763 221 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 RNF144AP50876 292 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 JAM2P57087 298 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 RNASE9P60153 205 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 CDR2Q01850 454 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 KLHL30Q0D2K2 578 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 NR1I3Q14994 352 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 DCAF6Q58WW2 860 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 EFHC1Q5JVL4 640 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM102AQ5T9C2 384 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 KLHDC10Q6PID8 442 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 FAM183BPQ6ZVS7 135 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 VPS36Q86VN1 386 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 RALGPS2Q86X27 583 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 SCML4Q8N228 414 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 CPA5Q8WXQ8 436 aa7.54□□□□□ -1.2
NPLOC4-221ENST00000625705 RNF34Q969K3 372 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms