RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 OTUD1Q5VV17 481 aaPredicted RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 TRIM72Q6ZMU5 477 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 C12orf40Q86WS4 652 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 DQX1Q8TE96 717 aaKnown RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 RNF139Q8WU17 664 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 EXOC4Q96A65 974 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 FCRL2Q96LA5 508 aaPredicted RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 ST7Q9NRC1 585 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 RBM12Q9NTZ6 932 aaKnown RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 AIPL1Q9NZN9 384 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 WDR35Q9P2L0 1181 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 LSM7Q9UK45 103 aaKnown RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 ZNF292O60281 2723 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 CACNA1IQ9P0X4 2223 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 A0A1W2PQJ5 194 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 KCNU1A8MYU2 1149 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 K7ESF4 209 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 IRAK2O43187 625 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 MSI1O43347 362 aaKnown RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 TULP3O75386 442 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 SP9P0CG40 484 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 IRF1P10914 325 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 NCAM1P13591 858 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 NBL1P41271 181 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 PRKCIP41743 596 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 GRIA2P42262 883 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 TNFRSF4P43489 277 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 KIR2DL1P43626 348 aaPredicted RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 CCR3P51677 355 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 CENPCQ03188 943 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 FAM133BQ5BKY9 247 aaKnown RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 MPP7Q5T2T1 576 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 ADGRF1Q5T601 910 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 PKN3Q6P5Z2 889 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 Q6ZS52 159 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 RSRC2Q7L4I2 434 aaKnown RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 TAC4Q86UU9 113 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 XYLT1Q86Y38 959 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 PHF13Q86YI8 300 aaPredicted RBP8.6□□□□□ -1.03
NEK3-209ENST00000618856 DENND1CQ8IV53 801 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 ZBTB44Q8NCP5 570 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 KCNV2Q8TDN2 545 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 C18orf8Q96DM3 657 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 SERPINB11Q96P15 392 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 SPAG5Q96R06 1193 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 PNKPQ96T60 521 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 NPY6RQ99463 290 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 TMEM51Q9NW97 253 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 CALCOCO1Q9P1Z2 691 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 SLC27A6Q9Y2P4 619 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 CEP83Q9Y592 693 aa8.6□□□□□ -1.03
NEK3-209ENST00000618856 FANCMQ8IYD8 2048 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 PIEZO1Q92508 2521 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TCRBV5S1A1TA0A578 114 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 H0Y858 1186 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 LILRB5O75023 590 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 RNF40O75150 1001 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 DAB1O75553 588 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 ENDOD1O94919 500 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 KAT7O95251 611 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TRUB2O95900 331 aaKnown RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 SERPINC1P01008 464 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 C7P10643 843 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TYRP14679 529 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 FERP16591 822 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 NOS2P35228 1153 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 PLA2G5P39877 138 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 MATKP42679 507 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 HARS2P49590 506 aaKnown RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 UBASH3AP57075 661 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TBX4P57082 545 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TPM4P67936 248 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 PITX1P78337 314 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 MRPS21P82921 87 aaKnown RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 PPP2R5DQ14738 602 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 CLEC16AQ2KHT3 1053 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 E4F1Q66K89 784 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 TRNP1Q6NT89 227 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 TOGARAM2Q6ZUX3 1019 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 SYT13Q7L8C5 426 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 KIAA0907Q7Z7F0 614 aaPredicted RBP8.59□□□□□ -1.03
NEK3-209ENST00000618856 ERICH1Q86X53 443 aa8.59□□□□□ -1.03
NEK3-209ENST00000618856 UNC45BQ8IWX7 931 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms