RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 EXOC3L4Q17RC7 722 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 AASDHQ4L235 1098 aaPredicted RBP26.32■■□□□ 1.8
VEGFA-228ENST00000617771 PLA2G2CQ5R387 149 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 PMS2CLQ68D20 193 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 MSANTD2Q6P1R3 559 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 IRF2BP1Q8IU81 584 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 FAM114A1Q8IWE2 563 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 DDI1Q8WTU0 396 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 THAP9Q9H5L6 903 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 APEX2Q9UBZ4 518 aa26.32■■□□□ 1.8
VEGFA-228ENST00000617771 SART1O43290 800 aaKnown RBP26.31■■□□□ 1.8
VEGFA-228ENST00000617771 LATS1O95835 1130 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 SLC9A1P19634 815 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 P2RY2P41231 377 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 WASP42768 502 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 ACADSBP45954 432 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 ZNF445P59923 1031 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 CREB5Q02930 508 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 CLEC4CQ8WTT0 213 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 P2RY11Q96G91 374 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 MIS12Q9H081 205 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 ST7Q9NRC1 585 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 VPS45Q9NRW7 570 aa26.31■■□□□ 1.8
VEGFA-228ENST00000617771 GFRA2O00451 464 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 MSI1O43347 362 aaKnown RBP26.3■■□□□ 1.8
VEGFA-228ENST00000617771 LETM1O95202 739 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-228ENST00000617771 BCKDHBP21953 392 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 GNA15P30679 374 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 GPD2P43304 727 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 E2F5Q15329 346 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 SF3A2Q15428 464 aaKnown RBP26.3■■□□□ 1.8
VEGFA-228ENST00000617771 MPPE1Q53F39 396 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 CLEC17AQ6ZS10 378 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 ACOX2Q99424 681 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 GABRG3Q99928 467 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 SLC2A11Q9BYW1 496 aa26.3■■□□□ 1.8
VEGFA-228ENST00000617771 A0A1W2PQF6 199 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 BCLAF3A2AJT9 711 aaKnown RBP26.29■■□□□ 1.8
VEGFA-228ENST00000617771 SLC30A4O14863 429 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 MAP3K13O43283 966 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 THAP12O43422 761 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 ERCC5P28715 1186 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-228ENST00000617771 RPL34P49207 117 aaKnown RBP26.29■■□□□ 1.8
VEGFA-228ENST00000617771 MAN2A1Q16706 1144 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 ARHGAP44Q17R89 818 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 DPCR1Q3MIW9 517 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 DENND1BQ6P3S1 775 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 GJB7Q6PEY0 223 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 ANKS1BQ7Z6G8 1248 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 STK32AQ8WU08 396 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 UCMAQ8WVF2 138 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 ZNF606Q8WXB4 792 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 RLN3Q8WXF3 142 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 STOML2Q9UJZ1 356 aa26.29■■□□□ 1.8
VEGFA-228ENST00000617771 DNAH14Q0VDD8 3507 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 RALGAPA1Q6GYQ0 2036 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 NPC1O15118 1278 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 GDF9O60383 454 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 CAVIN2O95810 425 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 GABRG2P18507 467 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 USP8P40818 1118 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 ADGRF1Q5T601 910 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 NUGGCQ68CJ6 796 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 SMYD5Q6GMV2 418 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 LPCAT2Q7L5N7 544 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 UNC45BQ8IWX7 931 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 IPO4Q8TEX9 1081 aaKnown RBP26.28■■□□□ 1.8
VEGFA-228ENST00000617771 TRIM62Q9BVG3 475 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 CACNA2D2Q9NY47 1150 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 SPAG17Q6Q759 2223 aa26.28■■□□□ 1.8
VEGFA-228ENST00000617771 NCAM1P13591 858 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 PON1P27169 355 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 GEN1Q17RS7 908 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 MAP7D1Q3KQU3 841 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 SCUBE3Q8IX30 993 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 FAM149B1Q96BN6 582 aa26.27■■□□□ 1.8
VEGFA-228ENST00000617771 PIWIL1Q96J94 861 aaKnown RBP26.27■■□□□ 1.8
VEGFA-228ENST00000617771 TSPAN3O60637 253 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 IGLV3-27P01718 113 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 PRKCSHP14314 528 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-228ENST00000617771 SLC11A2P49281 568 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 DHPSP49366 369 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-228ENST00000617771 LIMK1P53667 647 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 TBX4P57082 545 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 RING1Q06587 406 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 EIF4HQ15056 248 aaKnown RBP26.26■■□□□ 1.79
VEGFA-228ENST00000617771 CYP2U1Q7Z449 544 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 SHC3Q92529 594 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 TMA16Q96EY4 203 aaKnown RBP26.26■■□□□ 1.79
VEGFA-228ENST00000617771 SLC4A5Q9BY07 1137 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 SMOC1Q9H4F8 434 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 LMBRD1Q9NUN5 540 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 CALCOCO1Q9P1Z2 691 aa26.26■■□□□ 1.79
VEGFA-228ENST00000617771 BECN2A8MW95 431 aa26.25■■□□□ 1.79
VEGFA-228ENST00000617771 HOXD9P28356 352 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-228ENST00000617771 APBA1Q02410 837 aa26.25■■□□□ 1.79
VEGFA-228ENST00000617771 NNTQ13423 1086 aa26.25■■□□□ 1.79
VEGFA-228ENST00000617771 STARD3Q14849 445 aa26.25■■□□□ 1.79
VEGFA-228ENST00000617771 CT47A1Q5JQC4 288 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-228ENST00000617771 SPDYCQ5MJ68 293 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms