RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PDK2Q15119 407 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TMED2Q15363 201 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 HIF1AQ16665 826 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EFHC2Q5JST6 749 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 FAM26DQ5JW98 314 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 RNASEH2BQ5TBB1 312 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 BTBD8Q5XKL5 378 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LRRC31Q6UY01 552 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LEKR1Q6ZMV7 388 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DENND5BQ6ZUT9 1274 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 KDELC2Q7Z4H8 507 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TAC4Q86UU9 113 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 IGDCC3Q8IVU1 814 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SRRM1Q8IYB3 904 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 EIF1ADQ8N9N8 165 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 BCAS4Q8TDM0 211 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 USP33Q8TEY7 942 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 PYROXD1Q8WU10 500 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.56□□□□□ -1.84
LIG4-205ENST00000614526 SEPT8Q92599 483 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 PRCCQ92733 491 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 CFAP36Q96G28 342 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 KLF6Q99612 283 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 PAIP2Q9BPZ3 127 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 TSEN34Q9BSV6 310 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 COLEC11Q9BWP8 271 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CRISPLD1Q9H336 500 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 KIF9Q9HAQ2 790 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 USP29Q9HBJ7 922 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ETNK1Q9HBU6 452 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 PCDH9Q9HC56 1237 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 UBN1Q9NPG3 1134 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ARHGEF4Q9NR80 690 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DTLQ9NZJ0 730 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 RSPH14Q9UHP6 348 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 FZD10Q9ULW2 581 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 PHF24Q9UPV7 400 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DRG1Q9Y295 367 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 UNC80Q8N2C7 3258 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CASP8AP2Q9UKL3 1982 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 A0A1W2PQH9 124 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 E7EVH7 732 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 GOLGA8RI6L899 631 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 M0QZQ0 153 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DNM1LO00429 736 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ADAM12O43184 909 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SPAG7O75391 227 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DAB1O75553 588 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ENDOD1O94919 500 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EOMESO95936 686 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SKIP12755 728 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ERCC2P18074 760 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CDK7P50613 346 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TPI1P60174 286 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 YWHAGP61981 247 aaKnown RBP eCLIP3.56□□□□□ -1.84
LIG4-205ENST00000614526 FAAP100Q0VG06 881 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DPYSL2Q16555 572 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 RTP2Q5QGT7 225 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 NCBP2-AS2Q69YL0 99 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 HEATR6Q6AI08 1181 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 FAM171BQ6P995 826 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LRIG3Q6UXM1 1119 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 C3orf62Q6ZUJ4 267 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SYDE1Q6ZW31 735 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 PALM2Q8IXS6 379 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 REM2Q8IYK8 340 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 SLC43A3Q8NBI5 491 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 FBXO36Q8NEA4 188 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 BCL7CQ8WUZ0 217 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 AUTS2Q8WXX7 1259 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CENPIQ92674 756 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 CASP10Q92851 521 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CASD1Q96PB1 797 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 APOL2Q9BQE5 337 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 C11orf84Q9BUA3 381 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 C12orf65Q9H3J6 166 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 PRDM12Q9H4Q4 367 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CNGB3Q9NQW8 809 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TMEM39AQ9NV64 488 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 OSER1Q9NX31 292 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TMEM161AQ9NX61 479 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 IL1RAPL1Q9NZN1 696 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 OR12D3Q9UGF7 316 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LCMT1Q9UIC8 334 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ADAM28Q9UKQ2 775 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 MAD1L1Q9Y6D9 718 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 C5orf42Q9H799 3197 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 EXOC1LA0A1B0GW35 172 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 HMGB1P1B2RPK0 211 aaPredicted RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 SPATA31D3P0C874 917 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 VAV1P15498 845 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 GBP1P32455 592 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 ELK3P41970 407 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 CCT5P48643 541 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 HNRNPH2P55795 449 aaKnown RBP3.55□□□□□ -1.84
LIG4-205ENST00000614526 PPP2R2AP63151 447 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 DSC1Q08554 894 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 EFEMP1Q12805 493 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 TAZQ16635 292 aa3.55□□□□□ -1.84
LIG4-205ENST00000614526 ZSCAN26Q16670 478 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms