RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 DPP3Q9NY33 737 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 CNTN3Q9P232 1028 aa14.53□□□□□ -0.08
COL6A1-207ENST00000612273 LOXHD1Q8IVV2 1947 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 IGKV6D-21A0A0A0MT36 114 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 GOLGA8QA0A0J9YX86 632 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 GOLGA8OA6NCC3 632 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 GOLGA8NF8WBI6 632 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 TPP1O14773 563 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 PROCP04070 461 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 MGAT1P26572 445 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 SERPINB6P35237 376 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 CCNG1P51959 295 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 MRPS35P82673 323 aaKnown RBP14.52□□□□□ -0.08
COL6A1-207ENST00000612273 MBTD1Q05BQ5 628 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 USP4Q13107 963 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 SURF1Q15526 300 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 LPCAT4Q643R3 524 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.08
COL6A1-207ENST00000612273 TSHZ1Q6ZSZ6 1077 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 KLK14Q9P0G3 267 aa14.52□□□□□ -0.08
COL6A1-207ENST00000612273 NEMP1O14524 444 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 PAPSS1O43252 624 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-207ENST00000612273 CD1EP15812 388 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 OAZ1P54368 228 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 PITX1P78337 314 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-207ENST00000612273 KIZQ2M2Z5 673 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 CCDC185Q8N715 623 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 RNF148Q8N7C7 305 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 DNERQ8NFT8 737 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 ADAM32Q8TC27 787 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF398Q8TD17 642 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 TLE6Q9H808 572 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 SSU72Q9NP77 194 aaKnown RBP14.52□□□□□ -0.09
COL6A1-207ENST00000612273 TXNDC16Q9P2K2 825 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 EFR3BQ9Y2G0 817 aa14.52□□□□□ -0.09
COL6A1-207ENST00000612273 HBS1LQ9Y450 684 aaKnown RBP14.52□□□□□ -0.09
COL6A1-207ENST00000612273 E9PBE3 544 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 IRF6O14896 467 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 CHADO15335 359 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 KLHL41O60662 606 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 LMNAP02545 664 aaKnown RBP14.51□□□□□ -0.09
COL6A1-207ENST00000612273 VDRP11473 427 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 HDAC4P56524 1084 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 CHSY1Q86X52 802 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 C18orf25Q96B23 403 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-207ENST00000612273 BCO2Q9BYV7 579 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 VCXQ9H320 206 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 TXNRD2Q9NNW7 524 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 HESX1Q9UBX0 185 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 BARX2Q9UMQ3 279 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-207ENST00000612273 BRWD3Q6RI45 1802 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 AP1G2O75843 785 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 DGKIO75912 1065 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ETS2P15036 469 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ANPEPP15144 967 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ACADSP16219 412 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ICAM3P32942 547 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 NME3Q13232 169 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ITGA9Q13797 1035 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 DLG2Q15700 870 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 FAM47CQ5HY64 1035 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 TMPRSS6Q8IU80 811 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 FZD8Q9H461 694 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 CAB39LQ9H9S4 337 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 PTPRHQ9HD43 1115 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 NDE1Q9NXR1 346 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 LRCH1Q9Y2L9 728 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 NDC80O14777 642 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 TYK2P29597 1187 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 NUMBP49757 651 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 DPY19L2Q6NUT2 758 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 LBX2Q6XYB7 198 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 C10orf107Q8IVU9 208 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 ARHGAP24Q8N264 748 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 SIGLEC10Q96LC7 697 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 C2orf40Q9H1Z8 148 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 IFT122Q9HBG6 1241 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 PAPOLBQ9NRJ5 636 aaKnown RBP14.51□□□□□ -0.09
COL6A1-207ENST00000612273 UBP1Q9NZI7 540 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 TAGLN3Q9UI15 199 aa14.51□□□□□ -0.09
COL6A1-207ENST00000612273 EVPLQ92817 2033 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 A8MXQ7 604 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 BPGMP07738 259 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 PFKMP08237 780 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF280AP59817 542 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 OCRLQ01968 901 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ENPEPQ07075 957 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF618Q5T7W0 954 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 RASIP1Q5U651 963 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ATG14Q6ZNE5 492 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 CTU1Q7Z7A3 348 aaKnown RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 WDR75Q8IWA0 830 aaKnown RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 CHST13Q8NET6 341 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 GSDMBQ8TAX9 411 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF184Q99676 751 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 EBNA1BP2Q99848 306 aaKnown RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 STX18Q9P2W9 335 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms