RNA–Protein interactions for RNA: ENST00000611967.4

PCSK6-215, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 1 (best) BASIC

Gene PCSK6, Length 3,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-215ENST00000611967 SH3PXD2AQ5TCZ1 1133 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 DUS1LQ6P1R4 473 aaKnown RBP22.54■■□□□ 1.2
PCSK6-215ENST00000611967 HHIPL2Q6UWX4 724 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 C10orf107Q8IVU9 208 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
PCSK6-215ENST00000611967 SUDS3Q9H7L9 328 aaPredicted RBP22.54■■□□□ 1.2
PCSK6-215ENST00000611967 SIRPGQ9P1W8 387 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 FETUBQ9UGM5 382 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 TTLL3Q9Y4R7 772 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 PMM2O15305 246 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 DNAJA2O60884 412 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 TNFAIP8O95379 198 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 MIPP30301 263 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 PPM1JQ5JR12 505 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 ANGEL2Q5VTE6 544 aaKnown RBP22.54■■□□□ 1.2
PCSK6-215ENST00000611967 WDR78Q5VTH9 848 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 DEPTORQ8TB45 409 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 MARK4Q96L34 752 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 KCNK16Q96T55 309 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 ZNF358Q9NW07 568 aa22.54■■□□□ 1.2
PCSK6-215ENST00000611967 K7ERI5 159 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 DHX15O43143 795 aaKnown RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 C4BPAP04003 597 aaKnown RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 AOC1P19801 751 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 KRT80Q6KB66 452 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 DENND1BQ6P3S1 775 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 NETO2Q8NC67 525 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 TFB1MQ8WVM0 346 aaKnown RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 EME1Q96AY2 570 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 TMA16Q96EY4 203 aaKnown RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 E7ESA3 106 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 KLF11O14901 512 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 CCNE2O96020 404 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 GRIA1P42261 906 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 RAP1GAPP47736 663 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 GMPSP49915 693 aaPredicted RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 PSMD7P51665 324 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 TEX44Q53QW1 395 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 MICALL2Q8IY33 904 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 KIAA0319LQ8IZA0 1049 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 TFAP2BQ92481 460 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 TMIGD2Q96BF3 282 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 NGRNQ9NPE2 291 aaKnown RBP22.53■■□□□ 1.2
PCSK6-215ENST00000611967 CISHQ9NSE2 258 aa22.53■■□□□ 1.2
PCSK6-215ENST00000611967 COX4I1P13073 169 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 STT3AP46977 705 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 IDH3AP50213 366 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 RAB6CQ53S08 254 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 CES3Q6UWW8 571 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 UNC5AQ6ZN44 842 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 MTMR12Q9C0I1 747 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 KLC2Q9H0B6 622 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 RAB6CQ9H0N0 254 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 FBXO40Q9UH90 709 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 APOEP02649 317 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 CD1EP15812 388 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 LRRC38Q5VT99 294 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 ITPRIPL1Q6GPH6 555 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 LPCAT2Q7L5N7 544 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 BLOC1S6Q9UL45 172 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 PAIP2BQ9ULR5 123 aaKnown RBP22.52■■□□□ 1.2
PCSK6-215ENST00000611967 ATP9BO43861 1147 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 CCDC166P0CW27 439 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 MRPS9P82933 396 aaKnown RBP22.52■■□□□ 1.2
PCSK6-215ENST00000611967 PPM1LQ5SGD2 360 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 ZNF554Q86TJ5 538 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 SNX32Q86XE0 403 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 ZNF778Q96MU6 729 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 ZDHHC15Q96MV8 337 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 TELO2Q9Y4R8 837 aa22.52■■□□□ 1.2
PCSK6-215ENST00000611967 STX16-NPEPL1H3BU86 382 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 CCNT2O60583 730 aaKnown RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 TBXAS1P24557 533 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 SLC5A2P31639 672 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 SNRPFP62306 86 aaKnown RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 CCDC142Q17RM4 750 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 KLHL35Q6PF15 583 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 SH2D5Q6ZV89 423 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 ADGRF2Q8IZF7 708 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 BHLHE22Q8NFJ8 381 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 ZDHHC7Q9NXF8 308 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 DMTF1Q9Y222 760 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 FIS1Q9Y3D6 152 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 APOC4-APOC2K7ER74 178 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 CSDE1O75534 798 aaKnown RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 SEC24DO94855 1032 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 APOC2P02655 101 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 TYK2P29597 1187 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 POLR2BP30876 1174 aaKnown RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 PTPN20Q4JDL3 420 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 FAM102AQ5T9C2 384 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 CDR2LQ86X02 465 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 LENG8Q96PV6 779 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 RMDN3Q96TC7 470 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 OXCT2Q9BYC2 517 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 C1orf21Q9H246 121 aa22.51■■□□□ 1.19
PCSK6-215ENST00000611967 WDR55Q9H6Y2 383 aaPredicted RBP22.51■■□□□ 1.19
PCSK6-215ENST00000611967 NRDE2Q9H7Z3 1164 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms