RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 GFPT1Q06210 699 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 MAMLD1Q13495 774 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 GRM2Q14416 872 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ITPRIPL2Q3MIP1 535 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 BRMS1LQ5PSV4 323 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 H2AFVQ71UI9 128 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 STRADAQ7RTN6 431 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 BNIPLQ7Z465 357 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 TAC4Q86UU9 113 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ADGRG2Q8IZP9 1017 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 CPA6Q8N4T0 437 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 CTNNBL1Q8WYA6 563 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ZNF653Q96CK0 615 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 SHDQ96IW2 340 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 BAG1Q99933 345 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 DDX50Q9BQ39 737 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 C8orf33Q9H7E9 229 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 FAM204AQ9H8W3 233 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 DDIT4Q9NX09 232 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 CNOT8Q9UFF9 292 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 PI4K2BG5E9Z4 385 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 M0QYT0 321 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 ADH1CP00326 375 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 CYP1A2P05177 515 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 RFC1P35251 1148 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 PRKCQQ04759 706 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 SIGLEC14Q08ET2 396 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 RUNX3Q13761 415 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 ACAP1Q15027 740 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 SPA17Q15506 151 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 EML3Q32P44 896 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 FAM217AQ8IXS0 508 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 CPXM2Q8N436 756 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 RIN3Q8TB24 985 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 CENPIQ92674 756 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 BTN2A3PQ96KV6 586 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 UVRAGQ9P2Y5 699 aa17.23■□□□□ 0.35
SHKBP1-219ENST00000599575 TMEM191CA6NGB0 347 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 EIF3CLB5ME19 914 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 MAN2B1O00754 1011 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 NRDCO43847 1150 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 TMEM253P0C7T8 217 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 ABCB4P21439 1286 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 GPD1P21695 349 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 CORO1AP31146 461 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 CXCR3P49682 368 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 SULT1E1P49888 294 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 GALCP54803 685 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 ADGRF1Q5T601 910 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 RALGPS2Q86X27 583 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 RXFP2Q8WXD0 754 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 FCRL2Q96LA5 508 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 MCEEQ96PE7 176 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 EIF3CQ99613 913 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 AGO1Q9UL18 857 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 WNT6Q9Y6F9 365 aa17.22■□□□□ 0.35
SHKBP1-219ENST00000599575 TCF20Q9UGU0 1960 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 MSI1O43347 362 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 KLKB1P03952 638 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 IRF1P10914 325 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 AIF1P55008 147 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 CCDC14Q49A88 953 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 PREPLQ4J6C6 727 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 SLC44A4Q53GD3 710 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 DENND1CQ8IV53 801 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 BBS7Q8IWZ6 715 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 ZNF557Q8N988 423 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 RNF34Q969K3 372 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 CALR3Q96L12 384 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 NELL2Q99435 816 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 THAP2Q9H0W7 228 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 SPHK2Q9NRA0 654 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 MARK1Q9P0L2 795 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 FBXL21Q9UKT6 434 aa17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 EPN1Q9Y6I3 576 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-219ENST00000599575 NARSO43776 548 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 ACSL4O60488 711 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 NDUFA10O95299 355 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 CYBBP04839 570 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 HMBSP08397 361 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 EIF2DP41214 584 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 RPL7AP62424 266 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 GAD2Q05329 585 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 NME3Q13232 169 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 TCEAL1Q15170 157 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 ARL13BQ3SXY8 428 aa17.2■□□□□ 0.34
SHKBP1-219ENST00000599575 MPP7Q5T2T1 576 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms