RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ZC3H12AQ5D1E8 599 aaKnown RBP23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 HTR3DQ70Z44 454 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 NT5C3BQ969T7 300 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 ZFYVE19Q96K21 471 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 INTUQ9ULD6 942 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 WNT6Q9Y6F9 365 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 SPTBN5Q9NRC6 3674 aaKnown RBP23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 NUP210Q8TEM1 1887 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC9A3R1O14745 358 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 CHADO15335 359 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 PTPN9P43378 593 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 ZNF143P52747 638 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 RING1Q06587 406 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 NUGGCQ68CJ6 796 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 DENND1CQ8IV53 801 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 UNC45BQ8IWX7 931 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 ACRBPQ8NEB7 543 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 FCRL2Q96LA5 508 aaPredicted RBP23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 LINC00597Q9H2U6 94 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 TBC1D14Q9P2M4 693 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 SORCS3Q9UPU3 1222 aa23.01■■□□□ 1.27
CHMP2A-204ENST00000597848 APOEP02649 317 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 KLKB1P03952 638 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC2A3P11169 496 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 PSMA2P25787 234 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 CCR1P32246 355 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 KRT83P78385 493 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 OGDHQ02218 1023 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 SH3PXD2AQ5TCZ1 1133 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 OTUD1Q5VV17 481 aaPredicted RBP23■■□□□ 1.27
CHMP2A-204ENST00000597848 BBS7Q8IWZ6 715 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 KIAA1958Q8N8K9 716 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 OSCP1Q8WVF1 389 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC39A13Q96H72 371 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 CNPY3Q9BT09 278 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 ADAM33Q9BZ11 813 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 PIGVQ9NUD9 493 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23■■□□□ 1.27
CHMP2A-204ENST00000597848 CALCOCO1Q9P1Z2 691 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC12A6Q9UHW9 1150 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 ZNF510Q9Y2H8 683 aa23■■□□□ 1.27
CHMP2A-204ENST00000597848 ARHGAP6O43182 974 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 CCP110O43303 1012 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 NARSO43776 548 aaKnown RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 GREM1O60565 184 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC34A2O95436 690 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 MOCS2O96007 188 aaPredicted RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 IGLV3-27P01718 113 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 RDXP35241 583 aaKnown RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 PDGFRLQ15198 375 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 TRIM68Q6AZZ1 485 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 KIAA1328Q86T90 577 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 ZNF564Q8TBZ8 553 aaPredicted RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 FAM172AQ8WUF8 416 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 IRF7Q92985 503 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 PGAP3Q96FM1 320 aaPredicted RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 DESI2Q9BSY9 194 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 TRIM7Q9C029 511 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 WDCPQ9H6R7 721 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 TMEM51Q9NW97 253 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 UVRAGQ9P2Y5 699 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 ANAPC7Q9UJX3 599 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 AGO1Q9UL18 857 aaKnown RBP22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 PAXBP1Q9Y5B6 917 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 C5orf42Q9H799 3197 aa22.99■■□□□ 1.27
CHMP2A-204ENST00000597848 SRFP11831 508 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC11A2P49281 568 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 CXCR3P49682 368 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 ATXN1P54253 815 aaKnown RBP22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 CCDC173Q0VFZ6 552 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 EIF4EBP2Q13542 120 aaPredicted RBP22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 Q6ZNB5 142 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 STRADAQ7RTN6 431 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 ATP6V0D2Q8N8Y2 350 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 SLC35G2Q8TBE7 412 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 ASIC4Q96FT7 647 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 FAM83CQ9BQN1 747 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 EBF3Q9H4W6 596 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 MUTYHQ9UIF7 546 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 TFR2Q9UP52 801 aa22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 REXO2Q9Y3B8 237 aaKnown RBP22.98■■□□□ 1.27
CHMP2A-204ENST00000597848 MYO1FO00160 1098 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 ENDOD1O94919 500 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 ARSAP15289 507 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 CCZ1BP86790 482 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 CCZ1P86791 482 aaPredicted RBP22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 TNK2Q07912 1038 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 PPP2R5DQ14738 602 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 RAB6CQ53S08 254 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 SCYL2Q6P3W7 929 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 RHOT2Q8IXI1 618 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 TTC8Q8TAM2 541 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 CSGALNACT1Q8TDX6 532 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 FNIP1Q8TF40 1166 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 RFFLQ8WZ73 363 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 CENPIQ92674 756 aaPredicted RBP22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 ATP2A3Q93084 1043 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 OTUB2Q96DC9 234 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 BTBD6Q96KE9 485 aa22.97■■□□□ 1.27
CHMP2A-204ENST00000597848 RAB6CQ9H0N0 254 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms