RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 NBL1P41271 181 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 NSFP46459 744 aaKnown RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 MLLT6P55198 1093 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 SEC13P55735 322 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 PITX1P78337 314 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 CDK17Q00537 523 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 KLHL30Q0D2K2 578 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 GRSF1Q12849 480 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIG1-211ENST00000596457 LRRC32Q14392 662 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 TRIP4Q15650 581 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 CLEC16AQ2KHT3 1053 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 C1orf228Q6PIY5 440 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 Q6ZNB5 142 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 TAC4Q86UU9 113 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 XYLT1Q86Y38 959 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 EXOC4Q96A65 974 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 EDEM3Q9BZQ6 932 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 TRIM5Q9C035 493 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 RBSNQ9H1K0 784 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 SEMA4AQ9H3S1 761 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 FAM204AQ9H8W3 233 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 FBRSL1Q9HCM7 1045 aaKnown RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
LIG1-211ENST00000596457 ADAM22Q9P0K1 906 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 MYO6Q9UM54 1294 aa11.55□□□□□ -0.56
LIG1-211ENST00000596457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.561e-8■■■□□ 14.7
LIG1-211ENST00000596457 GOLGA6L7A0A1B0GV03 622 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 DAB1O75553 588 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 GJB6O95452 261 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 TRUB2O95900 331 aaKnown RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 GLI1P08151 1106 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 CHRNB1P11230 501 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 UNGP13051 313 aaPredicted RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 CASP14P31944 242 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 CHKAP35790 457 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 OPRD1P41143 372 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 GABRB2P47870 512 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 SULT1E1P49888 294 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 NME3Q13232 169 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 TDRD12Q587J7 1177 aaKnown RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 DGKKQ5KSL6 1271 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 FSTL4Q6MZW2 842 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 C12orf40Q86WS4 652 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 ZDHHC17Q8IUH5 632 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 UNC45BQ8IWX7 931 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 KIAA1958Q8N8K9 716 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 DDI1Q8WTU0 396 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 XPO6Q96QU8 1125 aaKnown RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 PNKPQ96T60 521 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIG1-211ENST00000596457 TTYH3Q9C0H2 523 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 METTL5Q9NRN9 209 aaKnown RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 ASNSD1Q9NWL6 643 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 DDIT4Q9NX09 232 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIG1-211ENST00000596457 AIPL1Q9NZN9 384 aa11.54□□□□□ -0.56
LIG1-211ENST00000596457 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
LIG1-211ENST00000596457 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 A0A1W2PQJ5 194 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 MED19A0JLT2 244 aaPredicted RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 M0QYT0 321 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 APOEP02649 317 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 CYBBP04839 570 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 APODP05090 189 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 TYRP14679 529 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 NOS2P35228 1153 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 SLC11A2P49281 568 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ZBED6P86452 979 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 FZD5Q13467 585 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ANGPT1Q15389 498 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 GAB4Q2WGN9 574 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ZC3H12AQ5D1E8 599 aaKnown RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 TMEM196Q5HYL7 178 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 E4F1Q66K89 784 aaPredicted RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 NUGGCQ68CJ6 796 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 RFWD3Q6PCD5 774 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 SLC26A9Q7LBE3 791 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 GAS2L3Q86XJ1 694 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 DNAAF5Q86Y56 855 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 EMC1Q8N766 993 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 FCRL2Q96LA5 508 aaPredicted RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 SLC2A13Q96QE2 648 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ARHGEF4Q9NR80 690 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 DNAJC17Q9NVM6 304 aaKnown RBP11.53□□□□□ -0.56
LIG1-211ENST00000596457 DLGAP2Q9P1A6 1054 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 WDR35Q9P2L0 1181 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 ATRXP46100 2492 aa11.53□□□□□ -0.56
LIG1-211ENST00000596457 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.56
LIG1-211ENST00000596457 KIAA1549LQ6ZVL6 1849 aa11.52□□□□□ -0.57
LIG1-211ENST00000596457 TRIM24O15164 1050 aa11.52□□□□□ -0.57
LIG1-211ENST00000596457 IRAK2O43187 625 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms