RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 NOVA1P51513 510 aaKnown RBP17.82■□□□□ 0.44
CCDC9-202ENST00000595659 STX17P56962 302 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 BSPRYQ5W0U4 402 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 TTI2Q6NXR4 508 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 RRAGAQ7L523 313 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 SIX6OS1Q8N1H7 587 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 PPM1KQ8N3J5 372 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 NELFBQ8WX92 580 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 SORCS1Q8WY21 1168 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 MRGPRX1Q96LB2 322 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 NT5C1BQ96P26 610 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 ZSWIM1Q9BR11 485 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 NUSAP1Q9BXS6 441 aaKnown RBP17.82■□□□□ 0.44
CCDC9-202ENST00000595659 FAM124BQ9H5Z6 455 aaPredicted RBP17.82■□□□□ 0.44
CCDC9-202ENST00000595659 PILRBQ9UKJ0 227 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 CTNND2Q9UQB3 1225 aa17.82■□□□□ 0.44
CCDC9-202ENST00000595659 AP5Z1O43299 807 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 MSI1O43347 362 aaKnown RBP17.81■□□□□ 0.44
CCDC9-202ENST00000595659 GABBR2O75899 941 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 CYBBP04839 570 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 TBXAS1P24557 533 aaPredicted RBP17.81■□□□□ 0.44
CCDC9-202ENST00000595659 IL12RB1P42701 662 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 TRIP4Q15650 581 aaPredicted RBP17.81■□□□□ 0.44
CCDC9-202ENST00000595659 SH3PXD2AQ5TCZ1 1133 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 SLC36A4Q6YBV0 504 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 RNF139Q8WU17 664 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 CEP63Q96MT8 703 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 GTPBP4Q9BZE4 634 aaKnown RBP17.81■□□□□ 0.44
CCDC9-202ENST00000595659 SLC27A6Q9Y2P4 619 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 LAMA1P25391 3075 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 ABCA7Q8IZY2 2146 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 RALGAPA1Q6GYQ0 2036 aa17.81■□□□□ 0.44
CCDC9-202ENST00000595659 ENGP17813 658 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 BRD2P25440 801 aaKnown RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 PMLP29590 882 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 HARS2P49590 506 aaKnown RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 ZNF33AQ06730 810 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 FUT11Q495W5 492 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 PKDCCQ504Y2 493 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 SPDYCQ5MJ68 293 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 PMF1Q6P1K2 205 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 LCLAT1Q6UWP7 414 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 SLC41A1Q8IVJ1 513 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 ARHGEF19Q8IW93 802 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 TRIML1Q8N9V2 468 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 KCTD13Q8WZ19 329 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 PLD4Q96BZ4 506 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 PIWIL1Q96J94 861 aaKnown RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 GTPBP2Q9BX10 602 aaKnown RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 CIPCQ9C0C6 399 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 THAP10Q9P2Z0 257 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 EVLQ9UI08 416 aaPredicted RBP17.8■□□□□ 0.44
CCDC9-202ENST00000595659 KIAA1257Q9ULG3 409 aa17.8■□□□□ 0.44
CCDC9-202ENST00000595659 M0QYV0 167 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 GFRA2O00451 464 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 ZNF217O75362 1048 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 PAEPP09466 180 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 SETSIPP0DME0 302 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 DAOAP59103 153 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 LMAN2Q12907 356 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 TMEM215Q68D42 235 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 ANKS1BQ7Z6G8 1248 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 CACUL1Q86Y37 369 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 CPXM2Q8N436 756 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 DEFB124Q8NES8 71 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 LMO3Q8TAP4 145 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 CLEC4CQ8WTT0 213 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 SLC35F5Q8WV83 523 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 HSPA12BQ96MM6 686 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
CCDC9-202ENST00000595659 ELOVL2Q9NXB9 296 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 ANGPTL2Q9UKU9 493 aa17.79■□□□□ 0.44
CCDC9-202ENST00000595659 SYNCRIPO60506 623 aaKnown RBP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 NDUFS2O75306 463 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 KRT37O76014 449 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 PRKCHP24723 683 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 MAOBP27338 520 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 SGSHP51688 502 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 MORC3Q14149 939 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 ZNF234Q14588 700 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 STARD3Q14849 445 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 SLC23A3Q6PIS1 610 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 FAM217AQ8IXS0 508 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 ELOA2Q8IYF1 753 aaPredicted RBP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 RGL4Q8IZJ4 473 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 RBBP8NLQ8NC74 664 aaPredicted RBP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 OR2I1PQ8NGU4 316 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 UCMAQ8WVF2 138 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 MKRN2Q9H000 416 aaKnown RBP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 MIS12Q9H081 205 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 PRDM16Q9HAZ2 1276 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 CNGB3Q9NQW8 809 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 ABCC13Q9NSE7 274 aa17.78■□□□□ 0.44
CCDC9-202ENST00000595659 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 HBS1LQ9Y450 684 aaKnown RBP17.78■□□□□ 0.44
CCDC9-202ENST00000595659 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.44
CCDC9-202ENST00000595659 PMM2O15305 246 aa17.77■□□□□ 0.44
CCDC9-202ENST00000595659 HOXD9P28356 352 aaPredicted RBP17.77■□□□□ 0.44
CCDC9-202ENST00000595659 PPP1R2P41236 205 aa17.77■□□□□ 0.44
CCDC9-202ENST00000595659 ZNF252P-AS1Q0IIN9 211 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms