RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CACUL1Q86Y37 369 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 DENND1CQ8IV53 801 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 SLC4A11Q8NBS3 891 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 RBBP8NLQ8NC74 664 aaPredicted RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 FOXJ1Q92949 421 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 PIWIL1Q96J94 861 aaKnown RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 CDK5RAP1Q96SZ6 601 aaKnown RBP17.15■□□□□ 0.34
LIG1-205ENST00000593425 GPR174Q9BXC1 333 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 ITM2CQ9NQX7 267 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 CACNA1EQ15878 2313 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 SPEGQ15772 3267 aa17.15■□□□□ 0.34
LIG1-205ENST00000593425 FAM237AA0A1B0GTK4 181 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 MEI4A8MW99 385 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 H0Y626 953 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 TRIM16O95361 564 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 NCAM1P13591 858 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
LIG1-205ENST00000593425 GNSP15586 552 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 PRKCHP24723 683 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 COPAP53621 1224 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 RAD23BP54727 409 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 ADAM9Q13443 819 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 ZNF234Q14588 700 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 WDR45BQ5MNZ6 344 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 KRT39Q6A163 491 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 CPXM2Q8N436 756 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
LIG1-205ENST00000593425 ZCCHC9Q8N567 271 aaKnown RBP17.14■□□□□ 0.33
LIG1-205ENST00000593425 SORCS1Q8WY21 1168 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 DNASE2BQ8WZ79 361 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
LIG1-205ENST00000593425 EEF2KMTQ96G04 330 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 SPATA32Q96LK8 384 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 CISHQ9NSE2 258 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 MARCH2Q9P0N8 246 aa17.14■□□□□ 0.33
LIG1-205ENST00000593425 IGF2RP11717 2491 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 SLC12A8A0AV02 714 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 FAM221BA6H8Z2 402 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 TULP2O00295 520 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 NPC1O15118 1278 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 TPMTP51580 245 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 YWHAGP61981 247 aaKnown RBP eCLIP17.13■□□□□ 0.33
LIG1-205ENST00000593425 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 TRIP6Q15654 476 aaKnown RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 ZNF423Q2M1K9 1284 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 TMEM215Q68D42 235 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 ARHGAP17Q68EM7 881 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 RSRC2Q7L4I2 434 aaKnown RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 TMPRSS6Q8IU80 811 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 NAXDQ8IW45 347 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 UCMAQ8WVF2 138 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 NDRG1Q92597 394 aaKnown RBP17.13■□□□□ 0.33
LIG1-205ENST00000593425 TATDN2Q93075 761 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 SIPA1Q96FS4 1042 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 TMEM176AQ96HP8 235 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 ELOVL2Q9NXB9 296 aa17.13■□□□□ 0.33
LIG1-205ENST00000593425 A0A1B0GTW7 788 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 CYBBP04839 570 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 FTH1P19P0C7X4 201 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 GTF2H1P32780 548 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 MXI1P50539 228 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 TKTL1P51854 596 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 ZNF132P52740 706 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 FAM217AQ8IXS0 508 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
LIG1-205ENST00000593425 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 FBXL13Q8NEE6 735 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 DDI1Q8WTU0 396 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 ULBP1Q9BZM6 244 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 CIPCQ9C0C6 399 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 MIR1-1HGQ9H1L0 117 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 IL21RQ9HBE5 538 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 RAB20Q9NX57 234 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 STRIP2Q9ULQ0 834 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
LIG1-205ENST00000593425 TAF4O00268 1085 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 SYNCRIPO60506 623 aaKnown RBP17.11■□□□□ 0.33
LIG1-205ENST00000593425 HLA-EP13747 358 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
LIG1-205ENST00000593425 KRT85P78386 507 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 BNC1Q01954 994 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 EIF4HQ15056 248 aaKnown RBP17.11■□□□□ 0.33
LIG1-205ENST00000593425 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 ANKRD52Q8NB46 1076 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 CADM4Q8NFZ8 388 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 PRCCQ92733 491 aaPredicted RBP17.11■□□□□ 0.33
LIG1-205ENST00000593425 PLD4Q96BZ4 506 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms