RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 TLK1Q9UKI8 766 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 KIAA1257Q9ULG3 409 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 DCTN3O75935 186 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 METTL18O95568 372 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 FGFR1P11362 822 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 CPB1P15086 417 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 TAC1P20366 129 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 PDK2Q15119 407 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 TTC39CQ8N584 583 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 OR52K1Q8NGK4 314 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 RSRC1Q96IZ7 334 aaKnown RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 FGD4Q96M96 766 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 ADAM2Q99965 735 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 C20orf96Q9NUD7 363 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 KCNH4Q9UQ05 1017 aa11.67□□□□□ -0.54
TOP3A-217ENST00000584582 DRG1Q9Y295 367 aaKnown RBP11.67□□□□□ -0.54
TOP3A-217ENST00000584582 SERPINB3P29508 390 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 PGGT1BP53609 377 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 LILRA4P59901 499 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 TSPY1Q01534 308 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 POU6F1Q14863 301 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 ANKRD52Q8NB46 1076 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SREK1Q8WXA9 508 aaKnown RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 N4BP2L2Q92802 583 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 FAM161BQ96MY7 647 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SENP1Q9P0U3 644 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SLC39A10Q9ULF5 831 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 FAM237BA0A1B0GVD1 139 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 PDHA1P08559 390 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF132P52740 706 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 HDAC4P56524 1084 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 GPX6P59796 221 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SPRYD7Q5W111 196 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SLC26A11Q86WA9 606 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SPATA2LQ8IUW3 424 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 RAB3IPQ96QF0 476 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 SEPT5Q99719 369 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 TXNDC9O14530 226 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 PPP1R12AO14974 1030 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 HSPA4LO95757 839 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 RGS2P41220 211 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 CLDN10P78369 228 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 NOMO1Q15155 1222 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 MUM1Q2TAK8 710 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 BZW1Q7L1Q6 419 aaKnown RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
TOP3A-217ENST00000584582 CSPG4P5Q96PW8 444 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 TTC1Q99614 292 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 PAAF1Q9BRP4 392 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 TKTL2Q9H0I9 626 aa11.66□□□□□ -0.54
TOP3A-217ENST00000584582 MSI1O43347 362 aaKnown RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 BUD23O43709 281 aaKnown RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 BEST1O76090 585 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 MT-CO1P00395 513 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 GBP7Q8N8V2 638 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 AZIN2Q96A70 460 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 E2F7Q96AV8 911 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ZNF317Q96PQ6 595 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 EPAS1Q99814 870 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 PTPRHQ9HD43 1115 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 SFMBT1Q9UHJ3 866 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 KIAA0100Q14667 2235 aaKnown RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 CXorf49A8MYA2 514 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 MFSD11O43934 449 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ENDOD1O94919 500 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 NQO1P15559 274 aaKnown RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ZFXP17010 805 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 SERPINB4P48594 390 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 STX3Q13277 289 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 PRPSAP1Q14558 356 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ANKRD20A2Q5SQ80 823 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ANKRD20A1Q5TYW2 823 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 TTC39BQ5VTQ0 682 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 CMC1Q7Z7K0 106 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 POU5F2Q8N7G0 328 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 IGKV6-21A0A0C4DH24 114 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 GOLGA8QA0A0J9YX86 632 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 GOLGA8OA6NCC3 632 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 YJEFN3A6XGL0 299 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 E7ENQ6 273 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 GOLGA8NF8WBI6 632 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms