RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 SIX5Q8N196 739 aa22.54■■□□□ 1.2
TSEN54-208ENST00000583173 JOSD2Q8TAC2 188 aa22.54■■□□□ 1.2
TSEN54-208ENST00000583173 CSGALNACT1Q8TDX6 532 aa22.54■■□□□ 1.2
TSEN54-208ENST00000583173 PGAP3Q96FM1 320 aaPredicted RBP22.54■■□□□ 1.2
TSEN54-208ENST00000583173 SERPINB11Q96P15 392 aa22.54■■□□□ 1.2
TSEN54-208ENST00000583173 C8orf33Q9H7E9 229 aaPredicted RBP22.54■■□□□ 1.2
TSEN54-208ENST00000583173 LSM7Q9UK45 103 aaKnown RBP22.54■■□□□ 1.2
TSEN54-208ENST00000583173 FBXL21Q9UKT6 434 aa22.54■■□□□ 1.2
TSEN54-208ENST00000583173 C2CD4BA6NLJ0 364 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 KCNU1A8MYU2 1149 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 GJB6O95452 261 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 PDGFBP01127 241 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-208ENST00000583173 KRT3P12035 628 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 RRM1P23921 792 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 RFC1P35251 1148 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-208ENST00000583173 SLC25A52Q3SY17 297 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 DENND1CQ8IV53 801 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 TTC8Q8TAM2 541 aa22.53■■□□□ 1.2
TSEN54-208ENST00000583173 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.53■■□□□ 1.2
TSEN54-208ENST00000583173 METTL5Q9NRN9 209 aaKnown RBP22.53■■□□□ 1.2
TSEN54-208ENST00000583173 NFATC1O95644 943 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 LATS1O95835 1130 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 CYP17A1P05093 508 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 FECHP22830 423 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 GJA4P35212 333 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 SOX9P48436 509 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 MAMLD1Q13495 774 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 TSR1Q2NL82 804 aaKnown RBP22.52■■□□□ 1.2
TSEN54-208ENST00000583173 CCDC14Q49A88 953 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 TXNDC11Q6PKC3 985 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 RALGPS2Q86X27 583 aaPredicted RBP22.52■■□□□ 1.2
TSEN54-208ENST00000583173 TMEM25Q86YD3 366 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 UNC45BQ8IWX7 931 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 EMC1Q8N766 993 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 RXFP2Q8WXD0 754 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 CENPIQ92674 756 aaPredicted RBP22.52■■□□□ 1.2
TSEN54-208ENST00000583173 ZNHIT6Q9NWK9 470 aaKnown RBP22.52■■□□□ 1.2
TSEN54-208ENST00000583173 PIAS3Q9Y6X2 628 aa22.52■■□□□ 1.2
TSEN54-208ENST00000583173 SPECC1L-ADORA2AF8WAN1 911 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 CTHP32929 405 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 HARS2P49590 506 aaKnown RBP22.51■■□□□ 1.19
TSEN54-208ENST00000583173 CXCR3P49682 368 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 FZD5Q13467 585 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 SLC18A3Q16572 532 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 ZC3H12AQ5D1E8 599 aaKnown RBP22.51■■□□□ 1.19
TSEN54-208ENST00000583173 LY6G5CQ5SRR4 150 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 ALKBH5Q6P6C2 394 aaKnown RBP22.51■■□□□ 1.19
TSEN54-208ENST00000583173 VPS36Q86VN1 386 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 CPXM2Q8N436 756 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 CPA6Q8N4T0 437 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 MSANTD3Q96H12 275 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 SHDQ96IW2 340 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 TBCBQ99426 244 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 NHEJ1Q9H9Q4 299 aaPredicted RBP22.51■■□□□ 1.19
TSEN54-208ENST00000583173 SPHK2Q9NRA0 654 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 MARK1Q9P0L2 795 aa22.51■■□□□ 1.19
TSEN54-208ENST00000583173 M0QYT0 321 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 GBP1P32455 592 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 RPL7AP62424 266 aaKnown RBP22.5■■□□□ 1.19
TSEN54-208ENST00000583173 NR1H3Q13133 447 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 NUGGCQ68CJ6 796 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 NADSYN1Q6IA69 706 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 TPRG1Q6ZUI0 275 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.5■■□□□ 1.19
TSEN54-208ENST00000583173 CFAP57Q96MR6 1250 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 PANX2Q96RD6 677 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 SELENOOQ9BVL4 669 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 TMEM51Q9NW97 253 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.5■■□□□ 1.19
TSEN54-208ENST00000583173 DDIT4Q9NX09 232 aa22.5■■□□□ 1.19
TSEN54-208ENST00000583173 MTF2Q9Y483 593 aaPredicted RBP22.5■■□□□ 1.19
TSEN54-208ENST00000583173 COL4A3Q01955 1670 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 KANSL1LA0AUZ9 987 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 MAN2B1O00754 1011 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 TRDMT1O14717 391 aaKnown RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 HOXC11O43248 304 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 ACSL4O60488 711 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 PDGFRAP16234 1089 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 CD72P21854 359 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 CHKAP35790 457 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 OPRD1P41143 372 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 PTPN9P43378 593 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 GFPT1Q06210 699 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 PPP2R5DQ14738 602 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 FAM133BQ5BKY9 247 aaKnown RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 CCDC122Q5T0U0 273 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 ADGRF1Q5T601 910 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 CWF19L1Q69YN2 538 aaKnown RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 DNAJC24Q6P3W2 148 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 TBC1D17Q9HA65 648 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 FBRSL1Q9HCM7 1045 aaKnown RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 ANLNQ9NQW6 1124 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 PIGVQ9NUD9 493 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 PARVAQ9NVD7 372 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 IMPACTQ9P2X3 320 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 XPO7Q9UIA9 1087 aaKnown RBP22.49■■□□□ 1.19
TSEN54-208ENST00000583173 FBXO10Q9UK96 956 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 STAP1Q9ULZ2 295 aa22.49■■□□□ 1.19
TSEN54-208ENST00000583173 TMEM191CA6NGB0 347 aa22.48■■□□□ 1.19
TSEN54-208ENST00000583173 I6L893 689 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms