RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GTPBP2Q9BX10 602 aaKnown RBP11.13□□□□□ -0.63
RFFL-209ENST00000581265 CCDC86Q9H6F5 360 aaKnown RBP11.13□□□□□ -0.63
RFFL-209ENST00000581265 FSCN3Q9NQT6 498 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 ITM2CQ9NQX7 267 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
RFFL-209ENST00000581265 THAP10Q9P2Z0 257 aaPredicted RBP11.13□□□□□ -0.63
RFFL-209ENST00000581265 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 RAD54BQ9Y620 910 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 STON1Q9Y6Q2 735 aa11.13□□□□□ -0.63
RFFL-209ENST00000581265 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 CEP192Q8TEP8 1941 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 FAM221BA6H8Z2 402 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 NDUFS2O75306 463 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 CD59P13987 128 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 CD6P30203 668 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 RAD23BP54727 409 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 KRT85P78386 507 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 HNRNPDQ14103 355 aaKnown RBP11.12□□□□□ -0.63
RFFL-209ENST00000581265 STARD3Q14849 445 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 E2F5Q15329 346 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 FUT11Q495W5 492 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ZNF394Q53GI3 561 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 WDR45BQ5MNZ6 344 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ARHGAP17Q68EM7 881 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ARHGAP18Q8N392 663 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 CPXM2Q8N436 756 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 DNASE2BQ8WZ79 361 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 SEMA4DQ92854 862 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
RFFL-209ENST00000581265 SLC2A11Q9BYW1 496 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
RFFL-209ENST00000581265 SLC6A17Q9H1V8 727 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 PRDM16Q9HAZ2 1276 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 CISHQ9NSE2 258 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 WSB2Q9NYS7 404 aaPredicted RBP11.12□□□□□ -0.63
RFFL-209ENST00000581265 MARCH2Q9P0N8 246 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 SUSD2Q9UGT4 822 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 AGO1Q9UL18 857 aaKnown RBP11.12□□□□□ -0.63
RFFL-209ENST00000581265 ZDHHC9Q9Y397 364 aa11.12□□□□□ -0.63
RFFL-209ENST00000581265 ZZEF1O43149 2961 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 SPEGQ15772 3267 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 TIMM44O43615 452 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 STX10O60499 249 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 GJB3O75712 270 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 GNSP15586 552 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 CORO1AP31146 461 aaKnown RBP11.11□□□□□ -0.63
RFFL-209ENST00000581265 IL12RB1P42701 662 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 EIF4HQ15056 248 aaKnown RBP11.11□□□□□ -0.63
RFFL-209ENST00000581265 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 DENND1CQ8IV53 801 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 FAM217AQ8IXS0 508 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 RGL4Q8IZJ4 473 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 RBBP8NLQ8NC74 664 aaPredicted RBP11.11□□□□□ -0.63
RFFL-209ENST00000581265 CADM4Q8NFZ8 388 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 TOE1Q96GM8 510 aaKnown RBP11.11□□□□□ -0.63
RFFL-209ENST00000581265 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 CD93Q9NPY3 652 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 ELOVL2Q9NXB9 296 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 USP36Q9P275 1121 aaKnown RBP11.11□□□□□ -0.63
RFFL-209ENST00000581265 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 STRIP2Q9ULQ0 834 aa11.11□□□□□ -0.63
RFFL-209ENST00000581265 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 ZNF202O95125 648 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 ZBED1O96006 694 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 IGLV3-19P01714 112 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 CYBBP04839 570 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 C7P10643 843 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 MAOBP27338 520 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 OXTRP30559 389 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 MXI1P50539 228 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 SLC8A3P57103 927 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 YWHAGP61981 247 aaKnown RBP eCLIP11.1□□□□□ -0.63
RFFL-209ENST00000581265 FAM193AP78312 1265 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 TRIP4Q15650 581 aaPredicted RBP11.1□□□□□ -0.63
RFFL-209ENST00000581265 ZNF423Q2M1K9 1284 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 PLEKHG6Q3KR16 790 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 KIAA1324Q6UXG2 1013 aaKnown RBP11.1□□□□□ -0.63
RFFL-209ENST00000581265 RSRC2Q7L4I2 434 aaKnown RBP11.1□□□□□ -0.63
RFFL-209ENST00000581265 OR2I1PQ8NGU4 316 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 TATDN2Q93075 761 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms