RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	FAM221B	A6H8Z2	402 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	TSPAN3	O60637	253 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	YEATS4	O95619	227 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CER1	O95813	267 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ASS1	P00966	412 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CAPNS1	P04632	268 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ATXN1L	P0C7T5	689 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	RALA	P11233	206 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ME1	P48163	572 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CSNK1E	P49674	416 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	IL9R	Q01113	521 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	BNC1	Q01954	994 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	HLA-B	Q31612	363 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ZACN	Q401N2	412 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	FYB2	Q5VWT5	728 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CNNM4	Q6P4Q7	775 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	RSRC2	Q7L4I2	434 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ANKS1B	Q7Z6G8	1248 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	CEP57L1	Q8IYX8	460 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	GOLGA5	Q8TBA6	731 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	RHBDD1	Q8TEB9	315 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	DDI1	Q8WTU0	396 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	LRIG1	Q96JA1	1093 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	HNRNPAB	Q99729	332 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	NT5C1A	Q9BXI3	368 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	IMPG2	Q9BZV3	1241 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	ZDHHC5	Q9C0B5	715 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	MAGEF1	Q9HAY2	307 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	APOBEC3G	Q9HC16	384 aa	Known RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	FAM13B	Q9NYF5	915 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	SERTAD1	Q9UHV2	236 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	BTBD3	Q9Y2F9	522 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	PLXNA2	O75051	1894 aa		10.1	□□□□□ -0.79
MSI2-208	ENST00000579466	MUC22	E2RYF6	1773 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	PVALEF	A0A1B0GWK0	134 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	SLC12A8	A0AV02	714 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	METTL12	A8MUP2	240 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	KCNK3	O14649	394 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	KLRC4	O43908	158 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	CBFA2T3	O75081	653 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	PENK	P01210	267 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	CYBB	P04839	570 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	RPN1	P04843	607 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	GCLM	P48507	274 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	KIF11	P52732	1056 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	COPA	P53621	1224 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	CLDN10	P78369	228 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	KMT5B	Q4FZB7	885 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	FNDC3B	Q53EP0	1204 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	SOWAHC	Q53LP3	525 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	KLHDC10	Q6PID8	442 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	TADA2B	Q86TJ2	420 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	TAS1R2	Q8TE23	839 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	CYB5D2	Q8WUJ1	264 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	DNASE2B	Q8WZ79	361 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	CRELD1	Q96HD1	420 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	ARID3A	Q99856	593 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	NIF3L1	Q9GZT8	377 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	LHX5	Q9H2C1	402 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	ITM2C	Q9NQX7	267 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	AGO1	Q9UL18	857 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	PCDHA7	Q9UN72	937 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	SLC27A6	Q9Y2P4	619 aa		10.09	□□□□□ -0.79
MSI2-208	ENST00000579466	URB1	O60287	2271 aa	Known RBP	10.09	□□□□□ -0.79
MSI2-208	ENST00000579466		K7ELQ4	463 aa	Predicted RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	FSBP	O95073	299 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	ZIC2	O95409	532 aa	Predicted RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	OXTR	P30559	389 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	ACSL1	P33121	698 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	CHKA	P35790	457 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	PSEN1	P49768	467 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	VAMP7	P51809	220 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	COG7	P83436	770 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	CYP4F3	Q08477	520 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	INCA1	Q0VD86	236 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	KIF19	Q2TAC6	998 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	C1orf220	Q5T0J3	134 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	RESP18	Q5W5W9	173 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	TMEM215	Q68D42	235 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	CCDC186	Q7Z3E2	898 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	METTL3	Q86U44	580 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	CADM4	Q8NFZ8	388 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	TMC2	Q8TDI7	906 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	NDRG1	Q92597	394 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	TAF4B	Q92750	862 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	INTS4	Q96HW7	963 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	PIWIL1	Q96J94	861 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	HEXIM2	Q96MH2	286 aa	Known RBP	10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	DCBLD2	Q96PD2	775 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	NUP58	Q9BVL2	599 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	DUSP16	Q9BY84	665 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	BACH2	Q9BYV9	841 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	KCTD10	Q9H3F6	313 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	DMAC2	Q9NW81	257 aa		10.08	□□□□□ -0.8
MSI2-208	ENST00000579466	ELOVL2	Q9NXB9	296 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms