RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 WBP2Q969T9 261 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 FAM83CQ9BQN1 747 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 LINC00597Q9H2U6 94 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 LUC7LQ9NQ29 371 aaKnown RBP16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 INTUQ9ULD6 942 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 WNT6Q9Y6F9 365 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 DOCK8Q8NF50 2099 aa16.2■□□□□ 0.18
SLC6A4-205ENST00000579221 PRUNE2Q8WUY3 3088 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 TMEM191CA6NGB0 347 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 SOWAHDA6NJG2 315 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 GREM1O60565 184 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 LCA5LO95447 670 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 APOEP02649 317 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 KLKB1P03952 638 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 TMEM253P0C7T8 217 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 CCR1P32246 355 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 PTPN9P43378 593 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 SLC11A2P49281 568 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 ZNF143P52747 638 aaPredicted RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 RPL7AP62424 266 aaKnown RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 MTA1Q13330 715 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 RUNX3Q13761 415 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 ZC3H12AQ5D1E8 599 aaKnown RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 TRNP1Q6NT89 227 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 Q6ZNB5 142 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 DENND1CQ8IV53 801 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 BBS7Q8IWZ6 715 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 ATP6V0D2Q8N8Y2 350 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 DNASE1L2Q92874 299 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 ATP2A3Q93084 1043 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 FCRL2Q96LA5 508 aaPredicted RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 TBCBQ99426 244 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 WDCPQ9H6R7 721 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 AGO1Q9UL18 857 aaKnown RBP16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
SLC6A4-205ENST00000579221 DCXO43602 365 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 NRDCO43847 1150 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 ENDOD1O94919 500 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 NDUFA10O95299 355 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 NFATC1O95644 943 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 LATS1O95835 1130 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 ALADP13716 330 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 CHKAP35790 457 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 ZXDAP98168 799 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 ATP11AP98196 1134 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 EML3Q32P44 896 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 BRMS1LQ5PSV4 323 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 TRIM68Q6AZZ1 485 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 STRADAQ7RTN6 431 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 TMEM139Q8IV31 216 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 CPA6Q8N4T0 437 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 CCDC112Q8NEF3 446 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 DDX50Q9BQ39 737 aaKnown RBP16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 CNPY3Q9BT09 278 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 EBF3Q9H4W6 596 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 UVRAGQ9P2Y5 699 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 NUP210Q8TEM1 1887 aaPredicted RBP16.18■□□□□ 0.18
SLC6A4-205ENST00000579221 SCAMP3O14828 347 aaKnown RBP16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 ACSL4O60488 711 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 ARSAP15289 507 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 TFE3P19532 575 aaPredicted RBP16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 PSMA2P25787 234 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 CXCR3P49682 368 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 KRT83P78385 493 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 C15orf59Q2T9L4 293 aaPredicted RBP16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 SLC44A4Q53GD3 710 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 RAD9BQ6WBX8 426 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 BNIPLQ7Z465 357 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 LRRC8AQ8IWT6 810 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 FNIP1Q8TF40 1166 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 EDAQ92838 391 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 ARHGEF26Q96DR7 871 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 ASIC4Q96FT7 647 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 BTN2A3PQ96KV6 586 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 NUP85Q9BW27 656 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 PIGVQ9NUD9 493 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 CTTNBP2NLQ9P2B4 639 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 FBXL21Q9UKT6 434 aa16.17■□□□□ 0.18
SLC6A4-205ENST00000579221 SPTBN5Q9NRC6 3674 aaKnown RBP16.16■□□□□ 0.18
SLC6A4-205ENST00000579221 KCNU1A8MYU2 1149 aa16.16■□□□□ 0.18
SLC6A4-205ENST00000579221 ARNTLO00327 626 aa16.16■□□□□ 0.18
SLC6A4-205ENST00000579221 RNF8O76064 485 aa16.16■□□□□ 0.18
SLC6A4-205ENST00000579221 MOCS2O96007 188 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms