RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	TRUB2	O95900	331 aa	Known RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CALB1	P05937	261 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	HMBS	P08397	361 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TPM1	P09493	284 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RRM1	P23921	792 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	NOS2	P35228	1153 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	EIF4A3	P38919	411 aa	Known RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MATK	P42679	507 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IFNAR2	P48551	515 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CDK17	Q00537	523 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RING1	Q06587	406 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RUNX3	Q13761	415 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DCAF6	Q58WW2	860 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PPP1R2P3	Q6NXS1	205 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PHLDB2	Q86SQ0	1253 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FAM217A	Q8IXS0	508 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADGRG2	Q8IZP9	1017 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SIX5	Q8N196	739 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	C3orf20	Q8ND61	904 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TTC16	Q8NEE8	873 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	JOSD2	Q8TAC2	188 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ADAM32	Q8TC27	787 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	OTUB2	Q96DC9	234 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	P2RY11	Q96G91	374 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FCRL2	Q96LA5	508 aa	Predicted RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SERPINB11	Q96P15	392 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DDX23	Q9BUQ8	820 aa	Known RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ECT2	Q9H8V3	914 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ARHGEF3	Q9NR81	526 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	METTL5	Q9NRN9	209 aa	Known RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	HEBP1	Q9NRV9	189 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TBC1D14	Q9P2M4	693 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	STOML2	Q9UJZ1	356 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	AGO1	Q9UL18	857 aa	Known RBP	11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	COL4A3	Q01955	1670 aa		11.29	□□□□□ -0.6
SLC12A4-215	ENST00000575857	C2CD4B	A6NLJ0	364 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SIGLEC16	A6NMB1	481 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TMCO5B	A8MYB1	307 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RTN2	O75298	545 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FTL	P02792	175 aa	Predicted RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CYP17A1	P05093	508 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	GLUL	P15104	373 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TFE3	P19532	575 aa	Predicted RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FECH	P22830	423 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CORO1A	P31146	461 aa	Known RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	SOX9	P48436	509 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	KPNA1	P52294	538 aa	Predicted RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TBX4	P57082	545 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	STARD6	P59095	220 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PRKCQ	Q04759	706 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DHCR24	Q15392	516 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	MLF2	Q15773	248 aa	Predicted RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ITPRIPL2	Q3MIP1	535 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PLEKHA7	Q6IQ23	1121 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	RHBDF2	Q6PJF5	856 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TXNDC11	Q6PKC3	985 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ZNF687	Q8N1G0	1237 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	EMC1	Q8N766	993 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	ATP2A3	Q93084	1043 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PGAP3	Q96FM1	320 aa	Predicted RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	DCLK3	Q9C098	648 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	IRF2BPL	Q9H1B7	796 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	LSM7	Q9UK45	103 aa	Known RBP	11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	CA14	Q9ULX7	337 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	TLR6	Q9Y2C9	796 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	PIAS3	Q9Y6X2	628 aa		11.28	□□□□□ -0.6
SLC12A4-215	ENST00000575857	KCNU1	A8MYU2	1149 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	ENDOD1	O94919	500 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	NFATC1	O95644	943 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	LATS1	O95835	1130 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	KRT3	P12035	628 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	AOC1	P19801	751 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	CTH	P32929	405 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	GJA4	P35212	333 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	RFC1	P35251	1148 aa	Predicted RBP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	CLCN5	P51795	746 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	NUBP1	P53384	320 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	RNASE9	P60153	205 aa	Known RBP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	MAMLD1	Q13495	774 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	ANGPT1	Q15389	498 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	SLC18A3	Q16572	532 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	SLC25A52	Q3SY17	297 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	CCDC14	Q49A88	953 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	LY6G5C	Q5SRR4	150 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	ALKBH5	Q6P6C2	394 aa	Known RBP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	VPS36	Q86VN1	386 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	DENND1C	Q8IV53	801 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	CPA6	Q8N4T0	437 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	TTC8	Q8TAM2	541 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	CSGALNACT1	Q8TDX6	532 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	RXFP2	Q8WXD0	754 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	AZIN2	Q96A70	460 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	MSANTD3	Q96H12	275 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	TBCB	Q99426	244 aa		11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.27	□□□□□ -0.61
SLC12A4-215	ENST00000575857	DDIT4	Q9NX09	232 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms