RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
SMG6-212ENST00000573153 GABRG2P18507 467 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 ARHGAP8P85298 464 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 MIIPQ5JXC2 388 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 TMEM215Q68D42 235 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 RBM43Q6ZSC3 357 aaKnown RBP18.09■□□□□ 0.49
SMG6-212ENST00000573153 RLN3Q8WXF3 142 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 IRGQQ8WZA9 623 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 HSFY1Q96LI6 401 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 CRACR2AQ9BSW2 395 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 TJP2Q9UDY2 1190 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 DACH1Q9UI36 760 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 ZNF510Q9Y2H8 683 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 HBS1LQ9Y450 684 aaKnown RBP18.09■□□□□ 0.49
SMG6-212ENST00000573153 RALGAPA1Q6GYQ0 2036 aa18.09■□□□□ 0.49
SMG6-212ENST00000573153 BCLAF3A2AJT9 711 aaKnown RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 HOXD9P28356 352 aaPredicted RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 MPLP40238 635 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 WASP42768 502 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 DGKGP49619 791 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 SGSHP51688 502 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 PREPLQ4J6C6 727 aaPredicted RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 TCEAL6Q6IPX3 200 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 WDTC1Q8N5D0 677 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 SHC3Q92529 594 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 TCEAL3Q969E4 200 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 MYEOVQ96EZ4 313 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 GBP4Q96PP9 640 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 XPO6Q96QU8 1125 aaKnown RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 SLC4A5Q9BY07 1137 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 UBE2TQ9NPD8 197 aaPredicted RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 CD93Q9NPY3 652 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 ABCC13Q9NSE7 274 aa18.08■□□□□ 0.48
SMG6-212ENST00000573153 OLA1Q9NTK5 396 aaKnown RBP18.08■□□□□ 0.48
SMG6-212ENST00000573153 NUP205Q92621 2012 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 TCRBV21S2A2A0A5A6 115 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 WASH3PC4AMC7 463 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 SLC30A4O14863 429 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 TM4SF5O14894 197 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 HOXB2P14652 356 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 PON1P27169 355 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 NTSR1P30989 418 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 CHKAP35790 457 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 EIF4EBP2Q13542 120 aaPredicted RBP18.07■□□□□ 0.48
SMG6-212ENST00000573153 FAM133BQ5BKY9 247 aaKnown RBP18.07■□□□□ 0.48
SMG6-212ENST00000573153 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 RSRC2Q7L4I2 434 aaKnown RBP18.07■□□□□ 0.48
SMG6-212ENST00000573153 DGLUCYQ7Z3D6 616 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 FAM114A1Q8IWE2 563 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 SIX6OS1Q8N1H7 587 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 NETO1Q8TDF5 533 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
SMG6-212ENST00000573153 STRIP2Q9ULQ0 834 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 NCOR2Q9Y618 2525 aa18.07■□□□□ 0.48
SMG6-212ENST00000573153 CKAP5Q14008 2032 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 LTFP02788 710 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 NDUFV2P19404 249 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 SLC6A4P31645 630 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 FOXK2Q01167 660 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 MAN2A1Q16706 1144 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 EXOC3L4Q17RC7 722 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 NADSYN1Q6IA69 706 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 KIAA0907Q7Z7F0 614 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 WFDC5Q8TCV5 224 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 GPT2Q8TD30 523 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 STK32AQ8WU08 396 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 HMGB4Q8WW32 186 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 SLC39A13Q96H72 371 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 LMLNQ96KR4 655 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 FCRL2Q96LA5 508 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 PRICKLE1Q96MT3 831 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 POLMQ9NP87 494 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 CACNA2D2Q9NY47 1150 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 THAP10Q9P2Z0 257 aaPredicted RBP18.06■□□□□ 0.48
SMG6-212ENST00000573153 APEX2Q9UBZ4 518 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 RAD54BQ9Y620 910 aa18.06■□□□□ 0.48
SMG6-212ENST00000573153 THADAQ6YHU6 1953 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 LATS1O95835 1130 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 IGLV3-25P01717 112 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 C7P10643 843 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 IL12RB1P42701 662 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 MTIF2P46199 727 aaKnown RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 LIMK1P53667 647 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 PITX1P78337 314 aaPredicted RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 KCNMA1Q12791 1236 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 TPD52L1Q16890 204 aaPredicted RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 USP39Q53GS9 565 aaKnown RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 TMEM110Q86TL2 294 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 DQX1Q8TE96 717 aaKnown RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 IPO4Q8TEX9 1081 aaKnown RBP18.05■□□□□ 0.48
SMG6-212ENST00000573153 RTKNQ9BST9 563 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 SLC6A17Q9H1V8 727 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 CALCOCO1Q9P1Z2 691 aa18.05■□□□□ 0.48
SMG6-212ENST00000573153 DCDC2BA2VCK2 349 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 E5RJQ4 531 aa18.04■□□□□ 0.48
SMG6-212ENST00000573153 FBXO21O94952 628 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms