RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 DCNP07585 359 aaKnown RBP16.48■□□□□ 0.23
CHD3-215ENST00000572750 UNGP13051 313 aaPredicted RBP16.48■□□□□ 0.23
CHD3-215ENST00000572750 GLULP15104 373 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 AOC1P19801 751 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 MMP8P22894 467 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 NSFP46459 744 aaKnown RBP16.48■□□□□ 0.23
CHD3-215ENST00000572750 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 PON2Q15165 354 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 DHCR24Q15392 516 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 TRIP4Q15650 581 aaPredicted RBP16.48■□□□□ 0.23
CHD3-215ENST00000572750 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 DCAF6Q58WW2 860 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 EFHC1Q5JVL4 640 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 LY6G5CQ5SRR4 150 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 SPECC1LQ69YQ0 1117 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 SARM1Q6SZW1 724 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 PHLDB2Q86SQ0 1253 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 ZDHHC17Q8IUH5 632 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 DENND1CQ8IV53 801 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 VSTM4Q8IW00 320 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 DEFB106AQ8N104 65 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 MSANTD3Q96H12 275 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 SLC2A13Q96QE2 648 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 FAM204AQ9H8W3 233 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 ASNSD1Q9NWL6 643 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 AIPL1Q9NZN9 384 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 RALYQ9UKM9 306 aaKnown RBP16.48■□□□□ 0.23
CHD3-215ENST00000572750 CAPN11Q9UMQ6 739 aa16.48■□□□□ 0.23
CHD3-215ENST00000572750 GPR179Q6PRD1 2367 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 FAM170BA6NMN3 283 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 MAN2B1O00754 1011 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 ADH1CP00326 375 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 IGLV3-27P01718 113 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 GLI1P08151 1106 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 ADH5P11766 374 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 SKILP12757 684 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 CASP14P31944 242 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 PRKCIP41743 596 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 CLCN5P51795 746 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 MLLT6P55198 1093 aaPredicted RBP16.47■□□□□ 0.23
CHD3-215ENST00000572750 ZBED6P86452 979 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 KLHL30Q0D2K2 578 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHD3-215ENST00000572750 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
CHD3-215ENST00000572750 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 BEND5Q7L4P6 421 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 ZNF571Q7Z3V5 609 aaPredicted RBP16.47■□□□□ 0.23
CHD3-215ENST00000572750 ADGRG2Q8IZP9 1017 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 ZNF687Q8N1G0 1237 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 ZNF397Q8NF99 534 aaPredicted RBP16.47■□□□□ 0.23
CHD3-215ENST00000572750 BHMTQ93088 406 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 OTUB2Q96DC9 234 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 SERPINB11Q96P15 392 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 TAS2R14Q9NYV8 317 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 AGO1Q9UL18 857 aaKnown RBP16.47■□□□□ 0.23
CHD3-215ENST00000572750 SIT1Q9Y3P8 196 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■■■■□ 21
CHD3-215ENST00000572750 ZZEF1O43149 2961 aa16.47■□□□□ 0.23
CHD3-215ENST00000572750 SYNJ2BP-COX16A0A087WUM0 186 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 IRAK2O43187 625 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 TRUB2O95900 331 aaKnown RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 TBX4P57082 545 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 PTP4A2Q12974 167 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 NR1H3Q13133 447 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 ANO4Q32M45 955 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 OTUD1Q5VV17 481 aaPredicted RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 TPGS1Q6ZTW0 290 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 MON1BQ7L1V2 547 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 C12orf40Q86WS4 652 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 TRIM5Q9C035 493 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 DCLK3Q9C098 648 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 SPHK2Q9NRA0 654 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 METTL5Q9NRN9 209 aaKnown RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 COX16Q9P0S2 106 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 MRPS17Q9Y2R5 130 aaKnown RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 LUC7L2Q9Y383 392 aaKnown RBP16.46■□□□□ 0.23
CHD3-215ENST00000572750 FRYQ5TBA9 3013 aa16.46■□□□□ 0.23
CHD3-215ENST00000572750 SPEGQ15772 3267 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 TMCO5BA8MYB1 307 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 GJB6O95452 261 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 IGLV3-25P01717 112 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 PLEKP08567 350 aaPredicted RBP16.45■□□□□ 0.22
CHD3-215ENST00000572750 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 FLT3P36888 993 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 OPRD1P41143 372 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 HARS2P49590 506 aaKnown RBP16.45■□□□□ 0.22
CHD3-215ENST00000572750 NNTQ13423 1086 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 C1orf228Q6PIY5 440 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 DNAAF5Q86Y56 855 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
CHD3-215ENST00000572750 P2RY11Q96G91 374 aa16.45■□□□□ 0.22
CHD3-215ENST00000572750 FCRL2Q96LA5 508 aaPredicted RBP16.45■□□□□ 0.22
CHD3-215ENST00000572750 ADAM33Q9BZ11 813 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms