RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 RAPGEF1Q13905 1077 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 EIF4A2Q14240 407 aaKnown RBP4.15□□□□□ -1.75
CDC27-213ENST00000571643 DEPDC1Q5TB30 811 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 ZNF626Q68DY1 528 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 SLC9A4Q6AI14 798 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 CXorf57Q6NSI4 855 aaKnown RBP4.15□□□□□ -1.75
CDC27-213ENST00000571643 KIRREL2Q6UWL6 708 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 NAPRTQ6XQN6 538 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 GLCCI1Q86VQ1 547 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 IZUMO1Q8IYV9 350 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 ABRAQ8N0Z2 381 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 GALNT16Q8N428 558 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 GALNT4Q8N4A0 578 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 SLC15A4Q8N697 577 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 CYP2W1Q8TAV3 490 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 SLC35G2Q8TBE7 412 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 RUNDC1Q96C34 613 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 LTV1Q96GA3 475 aaPredicted RBP4.15□□□□□ -1.75
CDC27-213ENST00000571643 ASB2Q96Q27 587 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 SNX18Q96RF0 628 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 TAAR9Q96RI9 348 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 P2RX7Q99572 595 aaKnown RBP4.15□□□□□ -1.75
CDC27-213ENST00000571643 NRBP1Q9UHY1 535 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 TBC1D30Q9Y2I9 924 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 NHSQ6T4R5 1651 aa4.15□□□□□ -1.75
CDC27-213ENST00000571643 ZNF831Q5JPB2 1677 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 BTN3A1O00481 513 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 NPHP1O15259 732 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 NPR1P16066 1061 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 EN2P19622 333 aaPredicted RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 SLC13A2Q13183 592 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 INSCQ1MX18 579 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 CC2D1BQ5T0F9 858 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 SLC18B1Q6NT16 456 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 PPP4R4Q6NUP7 873 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 ZNF66Q6ZN08 573 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 CATSPERGQ6ZRH7 1159 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 YTHDF3Q7Z739 585 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 WDR75Q8IWA0 830 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 SPARTQ8N0X7 666 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 SIRT6Q8N6T7 355 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 CELF5Q8N6W0 485 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 TERB1Q8NA31 727 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 PNLDC1Q8NA58 520 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 FYTTD1Q96QD9 318 aaKnown RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 PPP1R9BQ96SB3 815 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 THAP7Q9BT49 309 aaPredicted RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 ZNF518BQ9C0D4 1074 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 MS4A7Q9GZW8 240 aaPredicted RBP4.14□□□□□ -1.75
CDC27-213ENST00000571643 BHMT2Q9H2M3 363 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 ZHX3Q9H4I2 956 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 STAP2Q9UGK3 403 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 BTBD3Q9Y2F9 522 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 MEGF6O75095 1541 aa4.14□□□□□ -1.75
CDC27-213ENST00000571643 RREB1Q92766 1687 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 EP400Q96L91 3159 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 SHANK3Q9BYB0 1731 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 MBD3L4A6NDZ8 208 aaPredicted RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 MBD3L3A6NE82 208 aaPredicted RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 CAPN8A6NHC0 703 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 BTBD19C9JJ37 291 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 hCG_1984214I3L0E3 225 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 ADAMTS3O15072 1205 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 CCP110O43303 1012 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 TIMM44O43615 452 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 HTATSF1O43719 755 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 CYP2D6P10635 497 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 VDRP11473 427 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 KCNA3P22001 575 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 CTGFP29279 349 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 PPP2R1AP30153 589 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 TNNT2P45379 298 aaPredicted RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 MMP13P45452 471 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 RAB27AP51159 221 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 PLA1AQ53H76 456 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 C1orf141Q5JVX7 400 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 SULT6B1Q6IMI4 303 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 B3GNT9Q6UX72 402 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 SERPINA13PQ6UXR4 307 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 MAEAQ7L5Y9 396 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 CAND1Q86VP6 1230 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 MPP5Q8N3R9 675 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 C1orf131Q8NDD1 294 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 BPIFB1Q8TDL5 484 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 LRGUKQ96M69 825 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 ACO2Q99798 780 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 FAM118BQ9BPY3 351 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 RTFDC1Q9BY42 306 aaPredicted RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 ZCWPW1Q9H0M4 648 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 TMEM60Q9H2L4 133 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 ARNT2Q9HBZ2 717 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 TRIM36Q9NQ86 728 aa4.13□□□□□ -1.75
CDC27-213ENST00000571643 A1CFQ9NQ94 594 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 MRPS17Q9Y2R5 130 aaKnown RBP4.13□□□□□ -1.75
CDC27-213ENST00000571643 LY75O60449 1722 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 BTAF1O14981 1849 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ISM1B1AKI9 464 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms