RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DQX1Q8TE96 717 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATRIPQ8WXE1 791 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 NDRG1Q92597 394 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TBCBQ99426 244 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DDX23Q9BUQ8 820 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 APOL5Q9BWW9 433 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ALG2Q9H553 416 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF334Q9HCZ1 680 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 HCFC1R1Q9NWW0 138 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 IL37Q9NZH6 218 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TMEM59LQ9UK28 342 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 LSM7Q9UK45 103 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 COG5Q9UP83 839 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 NAALADL1Q9UQQ1 740 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MRPS23Q9Y3D9 190 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 MTCH2Q9Y6C9 303 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 DUSP10Q9Y6W6 482 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRIP11Q15643 1979 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 VWA8A3KMH1 1905 aa6.86□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC12A8A0AV02 714 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCDC66A2RUB6 948 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 LINC01565O15544 149 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 IRAK2O43187 625 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MSI1O43347 362 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 PSTPIP1O43586 416 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 TADA3O75528 432 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 GLP2RO95838 553 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRUB2O95900 331 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MOCS2O96007 188 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 KRT1P04264 644 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 KRT7P08729 469 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 IRF1P10914 325 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 PFKLP17858 780 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 COMTP21964 271 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 FSHRP23945 695 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CASQ1P31415 396 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCR1P32246 355 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SOX11P35716 441 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ATP5C1P36542 298 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 HARS2P49590 506 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MTA1Q13330 715 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 NNTQ13423 1086 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 KRT81Q14533 505 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 C15orf59Q2T9L4 293 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCDC14Q49A88 953 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 HABP4Q5JVS0 413 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 GPR158Q5T848 1215 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SEL1L2Q5TEA6 688 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 NUGGCQ68CJ6 796 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MSANTD2Q6P1R3 559 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 BHLHA9Q7RTU4 235 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 GRASPQ7Z6J2 395 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SCD5Q86SK9 330 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 FAM131BQ86XD5 332 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 DDX42Q86XP3 938 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 TMC8Q8IU68 726 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCDC50Q8IVM0 306 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC35F6Q8N357 371 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 C12orf76Q8N812 135 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MAB21L3Q8N8X9 362 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 UBE2Q2Q8WVN8 375 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 MYLIPQ8WY64 445 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ING5Q8WYH8 240 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZNF707Q96C28 371 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 PABPC5Q96DU9 382 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 NAPGQ99747 312 aaPredicted RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 TRIM7Q9C029 511 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 GOLPH3Q9H4A6 298 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 CCSER2Q9H7U1 834 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 ZWILCHQ9H900 591 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 NMUR1Q9HB89 426 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNMT3BQ9UBC3 853 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SLC12A6Q9UHW9 1150 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 DNAI1Q9UI46 699 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 SALL4Q9UJQ4 1053 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
CTDNEP1-204ENST00000570484 TYW5A2RUC4 315 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 LRRD1A4D1F6 860 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 C2orf78A6NCI8 922 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 MDM4O15151 490 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 SIAH2O43255 324 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 COCHO43405 550 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 TBX10O75333 385 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 LRCH4O75427 683 aa6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 OAS1P00973 400 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-204ENST00000570484 HMBSP08397 361 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms