RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ABCB4P21439 1286 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 ATP5C1P36542 298 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 CASP5P51878 434 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 UCNP55089 124 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 C21orf59P57076 290 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 HMGN5P82970 282 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 CAMK2GQ13555 558 aaPredicted RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 DUOXA2Q1HG44 320 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 COLEC12Q5KU26 742 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 BROXQ5VW32 411 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 TMEM215Q68D42 235 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 SERPINA13PQ6UXR4 307 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 DYMQ7RTS9 669 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 FAM35AQ86V20 835 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 GPD1LQ8N335 351 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 DCBLD1Q8N8Z6 715 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 SNRNP27Q8WVK2 155 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 RFFLQ8WZ73 363 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 LARP4BQ92615 738 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 MED8Q96G25 268 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 HIC2Q96JB3 615 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 AK8Q96MA6 479 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 ACE2Q9BYF1 805 aaPredicted RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 BTBD1Q9H0C5 482 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 MRPL44Q9H9J2 332 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 CYLDQ9NQC7 956 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 OSER1Q9NX31 292 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 IL17BQ9UHF5 180 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 CLEC4EQ9ULY5 219 aa11□□□□□ -0.65
CTDNEP1-202ENST00000570380 TDRD6O60522 2096 aaKnown RBP11□□□□□ -0.65
CTDNEP1-202ENST00000570380 TEX15Q9BXT5 2789 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 A8MXQ7 604 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 MDM4O15151 490 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 BEST1O76090 585 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 KLKB1P03952 638 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 BCAT1P54687 386 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 PCBP4P57723 403 aaKnown RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 RACK1P63244 317 aaKnown RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 INSM1Q01101 510 aaPredicted RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 GOLGA8FQ08AF8 430 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 GOLGA8DPQ0D2H9 430 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 ILKQ13418 452 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 RILPL1Q5EBL4 403 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 TRAPPC11Q7Z392 1133 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 ANKS1BQ7Z6G8 1248 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZMIZ2Q8NF64 920 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZNF578Q96N58 590 aaPredicted RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 SLC6A18Q96N87 628 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 DMAP1Q9NPF5 467 aaPredicted RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 TLR8Q9NR97 1041 aaKnown RBP10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 NUDT5Q9UKK9 219 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 LIMCH1Q9UPQ0 1083 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 BSNQ9UPA5 3926 aa10.99□□□□□ -0.65
CTDNEP1-202ENST00000570380 AHCTF1Q8WYP5 2266 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 STC2O76061 302 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 PRPF6O94906 941 aaKnown RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 GCNT3O95395 438 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 PLA2G4AP47712 749 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 RPS14P62263 151 aaKnown RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 GRIN1Q05586 938 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 BNIP3Q12983 259 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 EIF4HQ15056 248 aaKnown RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 KDM7AQ6ZMT4 941 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 PRICKLE2Q7Z3G6 844 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 CBWD2Q8IUF1 395 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 DHX40Q8IX18 779 aaKnown RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 SYCP3Q8IZU3 236 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZNF366Q8N895 744 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 SMOQ99835 787 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 MED10Q9BTT4 135 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 FGFBP2Q9BYJ0 223 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 TRIM4Q9C037 500 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 CIPCQ9C0C6 399 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 EBF2Q9HAK2 575 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 NMUR1Q9HB89 426 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 SEL1LQ9UBV2 794 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 PCDHB1Q9Y5F3 818 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 ATP8B3O60423 1300 aa10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 NYNRINQ9P2P1 1898 aaKnown RBP10.98□□□□□ -0.65
CTDNEP1-202ENST00000570380 A0A1W2PPC4 97 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 ZNF233A6NK53 670 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KLK10O43240 276 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 AP1G2O75843 785 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 MT-CO3P00414 261 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 CKMT2P17540 419 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 EPHA8P29322 1005 aaPredicted RBP10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 TNNC1P63316 161 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 E2F5Q15329 346 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 SURF1Q15526 300 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 SFMBT2Q5VUG0 894 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KIAA1614Q5VZ46 1190 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KIAA0895LQ68EN5 471 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
CTDNEP1-202ENST00000570380 KANSL1Q7Z3B3 1105 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms