RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 FRMD8Q9BZ67 464 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 GPR62Q9BZJ7 368 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 TRIM31Q9BZY9 425 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 RAB6CQ9H0N0 254 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 OSBPL2Q9H1P3 480 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 SMOC2Q9H3U7 446 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CWH43Q9H720 699 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CLIC5Q9NZA1 410 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 MTRRQ9UBK8 725 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 ANAPC5Q9UJX4 755 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 NAALADL1Q9UQQ1 740 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 NFS1Q9Y697 457 aa9.2□□□□□ -0.94
LSM3P5-201ENST00000566307 EIF3HO15372 352 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 MAP3K7O43318 606 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 AMHP03971 560 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 HAPLN1P10915 354 aaPredicted RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 PECAM1P16284 738 aaPredicted RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 LAG3P18627 525 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 OAS2P29728 719 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 GGCXP38435 758 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ALDH7A1P49419 539 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 GATMP50440 423 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ITGA8P53708 1063 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 YWHAGP61981 247 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 RPL10AP62906 217 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ROR1Q01973 937 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ZNF33AQ06730 810 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 DPYSQ14117 519 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 PPP2R5DQ14738 602 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 PAFAH1B3Q15102 231 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 LLGL1Q15334 1064 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 LRRC26Q2I0M4 334 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 P3H1Q32P28 736 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 USP41Q3LFD5 358 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 RNASEH2BQ5TBB1 312 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 EMC10Q5UCC4 262 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 IZUMO3Q5VZ72 239 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 MFSD5Q6N075 450 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 GSTA5Q7RTV2 222 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 NECAB2Q7Z6G3 386 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 FAM131BQ86XD5 332 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 TMEM199Q8N511 208 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 CCDC185Q8N715 623 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 DQX1Q8TE96 717 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 IGSF21Q96ID5 467 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 OLFM3Q96PB7 478 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 HAPLN3Q96S86 360 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 EPAS1Q99814 870 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 HERC2P3Q9BVR0 1158 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 TTLL2Q9BWV7 592 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 BRD8Q9H0E9 1235 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 EPB41L4BQ9H329 900 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 PLEKHA4Q9H4M7 779 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 DHX35Q9H5Z1 703 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 USP29Q9HBJ7 922 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 PIGVQ9NUD9 493 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ARHGEF38Q9NXL2 777 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 CWC15Q9P013 229 aaKnown RBP9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 FNIP2Q9P278 1114 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 ATP11BQ9Y2G3 1177 aa9.19□□□□□ -0.94
LSM3P5-201ENST00000566307 MTMR11A4FU01 709 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 A6NNZ2 444 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 SGK1O00141 431 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 DCLK1O15075 740 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 NCAM2O15394 837 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 IRAK2O43187 625 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 TCEA3O75764 348 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 ABHD2P08910 425 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 ZDHHC11BP0C7U3 371 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC2A3P11169 496 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 NCAM1P13591 858 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 TSHRP16473 764 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 HOXC13P31276 330 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 GRIK1P39086 918 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 CTCFP49711 727 aaPredicted RBP9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 TUBB8Q3ZCM7 444 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC45A4Q5BKX6 768 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 RTP2Q5QGT7 225 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 AGBL2Q5U5Z8 902 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 BTBD8Q5XKL5 378 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 TPGS2Q68CL5 300 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 NCBP2-AS2Q69YL0 99 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 PDZD4Q76G19 769 aaPredicted RBP9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 DEFB128Q7Z7B8 93 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 UBE2Q1Q7Z7E8 422 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 SCD5Q86SK9 330 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 PPIL6Q8IXY8 311 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 SLC7A14Q8TBB6 771 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 RNF139Q8WU17 664 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 RSAD2Q8WXG1 361 aa9.18□□□□□ -0.94
LSM3P5-201ENST00000566307 OVCA2Q8WZ82 227 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms