RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 GRIA2P42262 883 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 SEC13P55735 322 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 TBX4P57082 545 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 YWHAZP63104 245 aaKnown RBP10.36□□□□□ -0.75
CDH1-206ENST00000564676 SATB1Q01826 763 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ARID5AQ03989 594 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 TAF5Q15542 800 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 PTPN20Q4JDL3 420 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 DCAF6Q58WW2 860 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 EFHC1Q5JVL4 640 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 SYPL2Q5VXT5 272 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 GRAMD4Q6IC98 578 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 TOGARAM2Q6ZUX3 1019 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 FAM183BPQ6ZVS7 135 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 BEND5Q7L4P6 421 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ERICH1Q86X53 443 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ZNF677Q86XU0 584 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ETFBKMTQ8IXQ9 262 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 MSANTD4Q8NCY6 345 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 RPLP0P6Q8NHW5 317 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ADAM32Q8TC27 787 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
CDH1-206ENST00000564676 C18orf8Q96DM3 657 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
CDH1-206ENST00000564676 SERPINB11Q96P15 392 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 PRMT8Q9NR22 394 aaPredicted RBP10.36□□□□□ -0.75
CDH1-206ENST00000564676 DNAJC17Q9NVM6 304 aaKnown RBP10.36□□□□□ -0.75
CDH1-206ENST00000564676 PLK2Q9NYY3 685 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 MARK1Q9P0L2 795 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 A0A1B0GTH6 734 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 K7EQS6 105 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 CACNG3O60359 315 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 HSF2BPO75031 334 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 GRAP2O75791 330 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 LSM8O95777 96 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 GLI1P08151 1106 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 SLC11A2P49281 568 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 NRLP54845 237 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 RNASE9P60153 205 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 CDK17Q00537 523 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 FANCCQ00597 558 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 CDR2Q01850 454 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 SLC6A3Q01959 620 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 ZNF528Q3MIS6 628 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 C2orf27AQ580R0 203 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 NAA35Q5VZE5 725 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 NUGGCQ68CJ6 796 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 PKN3Q6P5Z2 889 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 ZC3H14Q6PJT7 736 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 TAC4Q86UU9 113 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 ZDHHC17Q8IUH5 632 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 CPXM2Q8N436 756 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 DDI1Q8WTU0 396 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 ATRIPQ8WXE1 791 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 CPA5Q8WXQ8 436 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 ACDQ96AP0 544 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 PIWIL1Q96J94 861 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 FAM204AQ9H8W3 233 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 ASNSD1Q9NWL6 643 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 ZSCAN32Q9NX65 697 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 NOCTQ9UK39 431 aaKnown RBP10.35□□□□□ -0.75
CDH1-206ENST00000564676 SLC8A2Q9UPR5 921 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 TLR6Q9Y2C9 796 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 R4GN57 208 aa10.35□□□□□ -0.75
CDH1-206ENST00000564676 SYNJ2BP-COX16A0A087WUM0 186 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 A0A0A0MRY4 1105 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 A0A1W2PQC6 194 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 CHURC1-FNTBB4DL54 471 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TRIM24O15164 1050 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 ACSL4O60488 711 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TSPAN3O60637 253 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 LATS1O95835 1130 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TRUB2O95900 331 aaKnown RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 IGLV3-27P01718 113 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 APOEP02649 317 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 FERP16591 822 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 CHRNB2P17787 502 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 GBP1P32455 592 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 NBL1P41271 181 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TNFRSF4P43489 277 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 DGKGP49619 791 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 UBASH3AP57075 661 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 ZNF445P59923 1031 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 NOMO3P69849 1222 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 MRPS21P82921 87 aaKnown RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 FMO1Q01740 532 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 RING1Q06587 406 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 MESP2Q0VG99 397 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 NNTQ13423 1086 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 NR1I3Q14994 352 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms