RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZDHHC4Q9NPG8 344 aa14.49□□□□□ -0.09
TPM1-230ENST00000561266 LSM7Q9UK45 103 aaKnown RBP14.49□□□□□ -0.09
TPM1-230ENST00000561266 DAAM1Q9Y4D1 1078 aa14.49□□□□□ -0.09
TPM1-230ENST00000561266 DMDP11532 3685 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 MYO15AQ9UKN7 3530 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 GOLGA6L19H0YKK7 550 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 NCAM2O15394 837 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 TSPAN3O60637 253 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 RNF40O75150 1001 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 LSM8O95777 96 aaKnown RBP14.48□□□□□ -0.09
TPM1-230ENST00000561266 TRUB2O95900 331 aaKnown RBP14.48□□□□□ -0.09
TPM1-230ENST00000561266 ADH1CP00326 375 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 CISD3P0C7P0 127 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 SP9P0CG40 484 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 TYRP14679 529 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 NUBP1P53384 320 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 SEC13P55735 322 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 TBX4P57082 545 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 ZNF445P59923 1031 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 RNASE9P60153 205 aaKnown RBP14.48□□□□□ -0.09
TPM1-230ENST00000561266 GOLGA8FQ08AF8 430 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 DMWDQ09019 674 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 GOLGA8DPQ0D2H9 430 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 GRSF1Q12849 480 aaKnown RBP eCLIP14.48□□□□□ -0.09
TPM1-230ENST00000561266 RAB6CQ53S08 254 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 FAM133BQ5BKY9 247 aaKnown RBP14.48□□□□□ -0.09
TPM1-230ENST00000561266 DGKKQ5KSL6 1271 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 RFWD3Q6PCD5 774 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 MMS22LQ6ZRQ5 1243 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 SLC26A9Q7LBE3 791 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 ERICH1Q86X53 443 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 ZNF677Q86XU0 584 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 C18orf8Q96DM3 657 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 AGPAT1Q99943 283 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 BBS2Q9BXC9 721 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 RAB6CQ9H0N0 254 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 KCNH6Q9H252 994 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 ANLNQ9NQW6 1124 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 ASNSD1Q9NWL6 643 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 TAS2R14Q9NYV8 317 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 MARK1Q9P0L2 795 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 STOML2Q9UJZ1 356 aa14.48□□□□□ -0.09
TPM1-230ENST00000561266 A0A0A0MRY4 1105 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 GOLGA8SH3BPF8 625 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 I6L893 689 aaPredicted RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 IRAK2O43187 625 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 SART1O43290 800 aaKnown RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 CACNG3O60359 315 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 PENKP01210 267 aaPredicted RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 SKILP12757 684 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 DRD1P21728 446 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 FLT3P36888 993 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 CLEC16AQ2KHT3 1053 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 ZC3H12AQ5D1E8 599 aaKnown RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 EFHC1Q5JVL4 640 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 C1orf228Q6PIY5 440 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 GAS2L3Q86XJ1 694 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 ZNF397Q8NF99 534 aaPredicted RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 PNKPQ96T60 521 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 C11orf70Q9BRQ4 267 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 DCLK3Q9C098 648 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 PRMT8Q9NR22 394 aaPredicted RBP14.47□□□□□ -0.09
TPM1-230ENST00000561266 TMEM59LQ9UK28 342 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 FBXO10Q9UK96 956 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 CEP83Q9Y592 693 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 USP34Q70CQ2 3546 aa14.47□□□□□ -0.09
TPM1-230ENST00000561266 SYNJ2BP-COX16A0A087WUM0 186 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 PRRT4C9JH25 899 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 K7ESF4 209 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 CAPN9O14815 690 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 HSF2BPO75031 334 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 DAB1O75553 588 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 KAT7O95251 611 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 GLI1P08151 1106 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 HNRNPLP14866 589 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■□□□ 13.3
TPM1-230ENST00000561266 FERP16591 822 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 MMP8P22894 467 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 MAGEA9P43362 315 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 ATXN1P54253 815 aaKnown RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 PTPN5P54829 565 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 CSTF1Q05048 431 aaKnown RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 RING1Q06587 406 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 LRRC32Q14392 662 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 ZNF571Q7Z3V5 609 aaPredicted RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 CPXM2Q8N436 756 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 SPEM1Q8N4L4 309 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 RPLP0P6Q8NHW5 317 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 JOSD2Q8TAC2 188 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 WFDC5Q8TCV5 224 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 IPO4Q8TEX9 1081 aaKnown RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 USP33Q8TEY7 942 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 CPLX3Q8WVH0 158 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 NOX5Q96PH1 765 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 NPY6RQ99463 290 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 NUCKS1Q9H1E3 243 aaKnown RBP14.46□□□□□ -0.09
TPM1-230ENST00000561266 SYNCQ9H7C4 482 aa14.46□□□□□ -0.09
TPM1-230ENST00000561266 ARHGEF4Q9NR80 690 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms