RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNF362Q5T0B9 420 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 ADGRF1Q5T601 910 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CST9LP1Q5W188 147 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ADALQ6DHV7 355 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TTI2Q6NXR4 508 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CDC73Q6P1J9 531 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZNF529Q6P280 563 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLBD1Q6P4A8 553 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 INTS5Q6P9B9 1019 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZDHHC24Q6UX98 284 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MAMDC4Q6UXC1 1216 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TMC5Q6UXY8 1006 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TRIM67Q6ZTA4 783 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 Q6ZVL8 140 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 USP51Q70EK9 711 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZNF365Q70YC5 407 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CXXC5Q7LFL8 322 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 GPRIN1Q7Z2K8 1008 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 NUP54Q7Z3B4 507 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MIER3Q7Z3K6 550 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLCO6A1Q86UG4 719 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TRABD2AQ86V40 505 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HOOK3Q86VS8 718 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PDSS2Q86YH6 399 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLXDC1Q8IUK5 500 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CLEC10AQ8IUN9 316 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 P3H2Q8IVL5 708 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CDAN1Q8IWY9 1227 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RHOT2Q8IXI1 618 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FAM20CQ8IXL6 584 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RNF168Q8IYW5 571 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D21Q8IYX1 336 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SYCP3Q8IZU3 236 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SCML4Q8N228 414 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZGPATQ8N5A5 531 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 TDRD5Q8NAT2 981 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC17A8Q8NDX2 589 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 REPS2Q8NFH8 660 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 IL17RDQ8NFM7 739 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 OR1N1Q8NGS0 311 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 LILRB1Q8NHL6 650 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 RASSF8Q8NHQ8 419 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RFWD2Q8NHY2 731 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SPATA20Q8TB22 786 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MDM1Q8TC05 714 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 DENND1AQ8TEH3 1009 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SH3RF3Q8TEJ3 882 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC22A17Q8WUG5 538 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 KCNE4Q8WWG9 221 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ASB11Q8WXH4 323 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 NCSTNQ92542 709 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PPP2R3CQ969Q6 453 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HES6Q96HZ4 224 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HHIPL1Q96JK4 782 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FAR2Q96K12 515 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PHACTR3Q96KR7 559 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MYRFLQ96LU7 910 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HEXIM2Q96MH2 286 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 TMEM237Q96Q45 408 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PRAM1Q96QH2 718 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PIP5K1AQ99755 562 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SMOQ99835 787 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FDXACB1Q9BRP7 624 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 NUDT22Q9BRQ3 303 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PI4K2AQ9BTU6 479 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 UTP14AQ9BVJ6 771 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLVAPQ9BX97 442 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 AMNQ9BXJ7 453 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 OSBPL1AQ9BXW6 950 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MRPL1Q9BYD6 325 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 TINAGL1Q9GZM7 467 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 REXO4Q9GZR2 422 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC5A7Q9GZV3 580 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 OSGEPL1Q9H4B0 414 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC32A1Q9H598 525 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLEKHA2Q9HB19 425 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RXFP1Q9HBX9 757 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 IL1RAPL2Q9NP60 686 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MID1IP1Q9NPA3 183 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PAPOLBQ9NRJ5 636 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 RBM28Q9NW13 759 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 ARHGEF38Q9NXL2 777 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLA2G2EQ9NZK7 142 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 NOP53Q9NZM5 478 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 JKAMPQ9P055 326 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLAMF8Q9P0V8 285 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PIM2Q9P1W9 311 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HCN3Q9P1Z3 774 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CPSF3Q9UKF6 684 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 WASF3Q9UPY6 502 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 AURKCQ9UQB9 309 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SMC3Q9UQE7 1217 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CDYLQ9Y232 598 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 OSGIN2Q9Y236 505 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 BTBD3Q9Y2F9 522 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ATP11BQ9Y2G3 1177 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZNF281Q9Y2X9 895 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SH3BP1Q9Y3L3 701 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FPGT-TNNI3KV9GXZ4 949 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 A0A0G2JNJ9 132 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms