RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 PNKPQ96T60 521 aa12.6□□□□□ -0.39
USP8-212ENST00000560730 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
USP8-212ENST00000560730 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
USP8-212ENST00000560730 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
USP8-212ENST00000560730 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
USP8-212ENST00000560730 GOLGA6L7A0A1B0GV03 622 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 CAPN9O14815 690 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 TSPAN3O60637 253 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 KAT7O95251 611 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 LSM8O95777 96 aaKnown RBP12.59□□□□□ -0.39
USP8-212ENST00000560730 IGLV3-25P01717 112 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
USP8-212ENST00000560730 PBX1P40424 430 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 HARS2P49590 506 aaKnown RBP12.59□□□□□ -0.39
USP8-212ENST00000560730 SEC13P55735 322 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 UBASH3AP57075 661 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 TPM4P67936 248 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 EMC10Q5UCC4 262 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 FYB2Q5VWT5 728 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 E4F1Q66K89 784 aaPredicted RBP12.59□□□□□ -0.39
USP8-212ENST00000560730 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 IRF2BP2Q7Z5L9 587 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 FAM217AQ8IXS0 508 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
USP8-212ENST00000560730 C18orf8Q96DM3 657 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 SLC39A13Q96H72 371 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 ADAM33Q9BZ11 813 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 ARHGEF4Q9NR80 690 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 WDR35Q9P2L0 1181 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 CLEC4EQ9ULY5 219 aa12.59□□□□□ -0.39
USP8-212ENST00000560730 A0A0A0MRY4 1105 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 GFRA2O00451 464 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 CACNG3O60359 315 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 HSF2BPO75031 334 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 PENKP01210 267 aaPredicted RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 APODP05090 189 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 GLI1P08151 1106 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 CISD3P0C7P0 127 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TDGF1P13385 188 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TFE3P19532 575 aaPredicted RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 SLC6A4P31645 630 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 CHKAP35790 457 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 EIF2DP41214 584 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 CXCL12P48061 93 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 SGSHP51688 502 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 SNX16P57768 344 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 RING1Q06587 406 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 EIF4EBP2Q13542 120 aaPredicted RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 C2orf27AQ580R0 203 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 ZC3H12AQ5D1E8 599 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 NADSYN1Q6IA69 706 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 RFWD3Q6PCD5 774 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TOGARAM2Q6ZUX3 1019 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 PHLDB2Q86SQ0 1253 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 CPXM2Q8N436 756 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 ZNF397Q8NF99 534 aaPredicted RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 RPLP0P6Q8NHW5 317 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 EXOC4Q96A65 974 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 MYEOVQ96EZ4 313 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TTYH3Q9C0H2 523 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 DNAJC17Q9NVM6 304 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 DEC1Q9P2X7 70 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 XPO7Q9UIA9 1087 aaKnown RBP12.58□□□□□ -0.4
USP8-212ENST00000560730 STOML2Q9UJZ1 356 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 HCN2Q9UL51 889 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 R4GN57 208 aa12.58□□□□□ -0.4
USP8-212ENST00000560730 EML5Q05BV3 1969 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 SYNJ2BP-COX16A0A087WUM0 186 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 K7ESF4 209 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 IRAK2O43187 625 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 ACSL4O60488 711 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 DAB1O75553 588 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 UNGP13051 313 aaPredicted RBP12.57□□□□□ -0.4
USP8-212ENST00000560730 PLA2G5P39877 138 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 GRIA2P42262 883 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 KIR2DL1P43626 348 aaPredicted RBP12.57□□□□□ -0.4
USP8-212ENST00000560730 CCR3P51677 355 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 CDK17Q00537 523 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 DMWDQ09019 674 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 PTP4A2Q12974 167 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 CLEC16AQ2KHT3 1053 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 FBXO43Q4G163 708 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 FAM133BQ5BKY9 247 aaKnown RBP12.57□□□□□ -0.4
USP8-212ENST00000560730 ADGRF1Q5T601 910 aa12.57□□□□□ -0.4
USP8-212ENST00000560730 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms