RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 MTF2Q9Y483 593 aaPredicted RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 BZW2Q9Y6E2 419 aaKnown RBP17.54■□□□□ 0.4
RPL28-209ENST00000560055 GFRA2O00451 464 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TRDMT1O14717 391 aaKnown RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 HOXC11O43248 304 aaPredicted RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 PI15O43692 258 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 LATS1O95835 1130 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TRUB2O95900 331 aaKnown RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 ADH1CP00326 375 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 SERPING1P05155 500 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 NOS2P35228 1153 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 MATKP42679 507 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 HARS2P49590 506 aaKnown RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 TBX4P57082 545 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 AMPD2Q01433 879 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TBX2Q13207 712 aaPredicted RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 LY6G5CQ5SRR4 150 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 OTUD1Q5VV17 481 aaPredicted RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TMEM25Q86YD3 366 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 DENND1CQ8IV53 801 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TMEM105Q8N8V8 129 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 P2RY11Q96G91 374 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 DNAJC7Q99615 494 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 SPHK2Q9NRA0 654 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 TAS2R14Q9NYV8 317 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 MARK1Q9P0L2 795 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 DLGAP2Q9P1A6 1054 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 MRPS17Q9Y2R5 130 aaKnown RBP17.53■□□□□ 0.4
RPL28-209ENST00000560055 SIT1Q9Y3P8 196 aa17.53■□□□□ 0.4
RPL28-209ENST00000560055 MYOFQ9NZM1 2061 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 FAM170BA6NMN3 283 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 CALB1P05937 261 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 GZMAP12544 262 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 AVPR2P30518 371 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 FLT3P36888 993 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 OPRD1P41143 372 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 CDK17Q00537 523 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 TCF15Q12870 199 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 UBXN2BQ14CS0 331 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 TMEM196Q5HYL7 178 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 NAIF1Q69YI7 327 aaPredicted RBP17.52■□□□□ 0.4
RPL28-209ENST00000560055 TRNP1Q6NT89 227 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 PPP1R2P3Q6NXS1 205 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 WDR59Q6PJI9 974 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 MCOLN2Q8IZK6 566 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 C3orf20Q8ND61 904 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 AZIN2Q96A70 460 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 CLDN23Q96B33 292 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 NPY6RQ99463 290 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 RRN3Q9NYV6 651 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPL28-209ENST00000560055 CALCOCO1Q9P1Z2 691 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 WDR35Q9P2L0 1181 aa17.52■□□□□ 0.4
RPL28-209ENST00000560055 DMDP11532 3685 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 CACNA1HO95180 2353 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 STK25O00506 426 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 MFAP3LO75121 409 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 PLEKP08567 350 aaPredicted RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 CHRNB1P11230 501 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 ADH5P11766 374 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 CHKAP35790 457 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 EIF2DP41214 584 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 ZNF75DP51815 510 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 RNASE9P60153 205 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 GAD2Q05329 585 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 PON2Q15165 354 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 TDRD12Q587J7 1177 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 BNIPLQ7Z465 357 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 UNC45BQ8IWX7 931 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 ETFBKMTQ8IXQ9 262 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 DRC7Q8IY82 874 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 CPXM2Q8N436 756 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 OR8K1Q8NGG5 319 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 VCPIP1Q96JH7 1222 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 FBRSL1Q9HCM7 1045 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 METTL5Q9NRN9 209 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 ARHGAP20Q9P2F6 1191 aa17.51■□□□□ 0.39
RPL28-209ENST00000560055 NDRG2Q9UN36 371 aaKnown RBP17.51■□□□□ 0.39
RPL28-209ENST00000560055 TFE3P19532 575 aaPredicted RBP17.5■□□□□ 0.39
RPL28-209ENST00000560055 CCINQ13939 588 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 SLC25A52Q3SY17 297 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 FAM133BQ5BKY9 247 aaKnown RBP17.5■□□□□ 0.39
RPL28-209ENST00000560055 ADGRF1Q5T601 910 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 FSTL4Q6MZW2 842 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 TMC6Q7Z403 805 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 PHLDB2Q86SQ0 1253 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 C12orf40Q86WS4 652 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 P2RY13Q9BPV8 354 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 FAM204AQ9H8W3 233 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
RPL28-209ENST00000560055 DDIT4Q9NX09 232 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms