RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TDRD7Q8NHU6 1098 aaKnown RBP6.9□□□□□ -1.3
RTF1-204ENST00000558117 TTC8Q8TAM2 541 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 ARNTL2Q8WYA1 636 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 TMEM74BQ9NUR3 256 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CTTNBP2NLQ9P2B4 639 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CFAP97Q9P2B7 532 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 TRGV11A0A075B6L2 103 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 A6NNZ2 444 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 FGBP02675 491 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 EGR2P11161 476 aaPredicted RBP6.89□□□□□ -1.31
RTF1-204ENST00000558117 IL1R1P14778 569 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 PIGFQ07326 219 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 SCAPQ12770 1279 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 AIMP1Q12904 312 aaKnown RBP6.89□□□□□ -1.31
RTF1-204ENST00000558117 PREPLQ4J6C6 727 aaPredicted RBP6.89□□□□□ -1.31
RTF1-204ENST00000558117 NPNTQ6UXI9 565 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 SCAMP4Q969E2 229 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 COQ10AQ96MF6 247 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 B3GNT5Q9BYG0 378 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 MTIF3Q9H2K0 278 aaKnown RBP6.89□□□□□ -1.31
RTF1-204ENST00000558117 GPR35Q9HC97 309 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 CASS4Q9NQ75 786 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 RLIMQ9NVW2 624 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 ZDHHC8Q9ULC8 765 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 NEU2Q9Y3R4 380 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 OTOGLQ3ZCN5 2332 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 PTPN13Q12923 2485 aa6.89□□□□□ -1.31
RTF1-204ENST00000558117 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 H3BQ06 376 aaPredicted RBP6.88□□□□□ -1.31
RTF1-204ENST00000558117 RARBP10826 455 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 CYBAP13498 195 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 IL12RB1P42701 662 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 VAV2P52735 878 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 ZNF135P52742 658 aaPredicted RBP6.88□□□□□ -1.31
RTF1-204ENST00000558117 FGL2Q14314 439 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 LLGL1Q15334 1064 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 GEN1Q17RS7 908 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 FKBP1CQ5VVH2 108 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 ANO1Q5XXA6 986 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 SLC30A10Q6XR72 485 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 GPR142Q7Z601 462 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 CLNKQ7Z7G1 428 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 GPR149Q86SP6 731 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 DAAM2Q86T65 1068 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 TMEM199Q8N511 208 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 BRIX1Q8TDN6 353 aaKnown RBP6.88□□□□□ -1.31
RTF1-204ENST00000558117 SMOQ99835 787 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 TOR3AQ9H497 397 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 TXNRD2Q9NNW7 524 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.88□□□□□ -1.31
RTF1-204ENST00000558117 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 DMTF1Q9Y222 760 aa6.88□□□□□ -1.31
RTF1-204ENST00000558117 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 MYADML2A6NDP7 307 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 TOR1BO14657 336 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 TGM1P22735 817 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 MAPK4P31152 587 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 AGFG1P52594 562 aaKnown RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 SOX8P57073 446 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 MC2RQ01718 297 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 HABP2Q14520 560 aaPredicted RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 USP37Q86T82 979 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 SCYL3Q8IZE3 742 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 SLC44A3Q8N4M1 653 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 TMEM125Q96AQ2 219 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 PTCD3Q96EY7 689 aaKnown RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 EDC3Q96F86 508 aaKnown RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 TRIB1Q96RU8 372 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 PORCNQ9H237 461 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 UNKLQ9H9P5 680 aaKnown RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 SARS2Q9NP81 518 aaKnown RBP6.87□□□□□ -1.31
RTF1-204ENST00000558117 C1orf112Q9NSG2 853 aa6.87□□□□□ -1.31
RTF1-204ENST00000558117 CCDC195A0A1B0GUA6 201 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 SUN1O94901 812 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 KIF20AO95235 890 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 KCNA2P16389 499 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 MPP3Q13368 585 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 GRM3Q14832 879 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 CCDC181Q5TID7 509 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 SWSAP1Q6NVH7 229 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 TAPT1Q6NXT6 567 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 C15orf52Q6ZUT6 534 aaKnown RBP6.86□□□□□ -1.31
RTF1-204ENST00000558117 PCSK9Q8NBP7 692 aaKnown RBP6.86□□□□□ -1.31
RTF1-204ENST00000558117 GPRC5AQ8NFJ5 357 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 FUBP1Q96AE4 644 aaKnown RBP6.86□□□□□ -1.31
RTF1-204ENST00000558117 MRGPRX1Q96LB2 322 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 Q96MF0 132 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 AGAP2Q99490 1192 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
RTF1-204ENST00000558117 SIK2Q9H0K1 926 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 ZMAT3Q9HA38 289 aaKnown RBP6.86□□□□□ -1.31
RTF1-204ENST00000558117 ATP6V0A4Q9HBG4 840 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 OBP2AQ9NY56 170 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 ETAA1Q9NY74 926 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 MYO18BQ8IUG5 2567 aa6.86□□□□□ -1.31
RTF1-204ENST00000558117 ZNF462Q96JM2 2506 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms