RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	DCAF6	Q58WW2	860 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	FIGN	Q5HY92	759 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	TMEM31	Q5JXX7	168 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	SH3PXD2A	Q5TCZ1	1133 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	OTUD1	Q5VV17	481 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	KLHDC10	Q6PID8	442 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	WDR59	Q6PJI9	974 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	HTR3D	Q70Z44	454 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	TAC4	Q86UU9	113 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	RETREG3	Q86VR2	466 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	C12orf40	Q86WS4	652 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	ARHGAP18	Q8N392	663 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	ZNF276	Q8N554	614 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	EMC1	Q8N766	993 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	NAT16	Q8N8M0	369 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	JOSD2	Q8TAC2	188 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	CSGALNACT1	Q8TDX6	532 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	DQX1	Q8TE96	717 aa	Known RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	EZH1	Q92800	747 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	BHMT	Q93088	406 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	C18orf8	Q96DM3	657 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	MYEOV	Q96EZ4	313 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	C11orf70	Q9BRQ4	267 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	IRX2	Q9BZI1	471 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	TRIM5	Q9C035	493 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	KIF9	Q9HAQ2	790 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	TRPV5	Q9NQA5	729 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	ANLN	Q9NQW6	1124 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	RBM12	Q9NTZ6	932 aa	Known RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	POLR3B	Q9NW08	1133 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	COX16	Q9P0S2	106 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	XPO7	Q9UIA9	1087 aa	Known RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	AGO1	Q9UL18	857 aa	Known RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	NDRG2	Q9UN36	371 aa	Known RBP	9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778	DOCK6	Q96HP0	2047 aa		9.2	□□□□□ -0.94
PRKCH-222	ENST00000556778		A0A1W2PQJ5	194 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	E2F8	A0AVK6	867 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	CAPN9	O14815	690 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TSPAN3	O60637	253 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	LSM8	O95777	96 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	CYP17A1	P05093	508 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TCF3	P15923	654 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TNFAIP3	P21580	790 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TARS	P26639	723 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	CORO1A	P31146	461 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	FLT3	P36888	993 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	IFNAR2	P48551	515 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ZNF75D	P51815	510 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ZBED6	P86452	979 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	PFKP	Q01813	784 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	KLHL30	Q0D2K2	578 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	UBXN2B	Q14CS0	331 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	PON2	Q15165	354 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	PDGFRL	Q15198	375 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TRIP4	Q15650	581 aa	Predicted RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ITPRIPL2	Q3MIP1	535 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ZC3H12A	Q5D1E8	599 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	LY6G5C	Q5SRR4	150 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	SPECC1L	Q69YQ0	1117 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	SARM1	Q6SZW1	724 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778		Q6ZNB5	142 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TPGS1	Q6ZTW0	290 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ZNF677	Q86XU0	584 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	FAM3C	Q92520	227 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	DNASE1L2	Q92874	299 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	FCRL2	Q96LA5	508 aa	Predicted RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	NOX5	Q96PH1	765 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	SLC2A13	Q96QE2	648 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	DDX23	Q9BUQ8	820 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	NUP58	Q9BVL2	599 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	C1QTNF1	Q9BXJ1	281 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	MAGEB5	Q9BZ81	275 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	EDEM3	Q9BZQ6	932 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	MFSD1	Q9H3U5	465 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	POPDC2	Q9HBU9	364 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TMPRSS4	Q9NRS4	437 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	C2orf42	Q9NWW7	574 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	PLK2	Q9NYY3	685 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	ARHGAP20	Q9P2F6	1191 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	TMEM59L	Q9UK28	342 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	CLEC4E	Q9ULY5	219 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	MYO6	Q9UM54	1294 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	LUC7L2	Q9Y383	392 aa	Known RBP	9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	DAAM1	Q9Y4D1	1078 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	CEP83	Q9Y592	693 aa		9.19	□□□□□ -0.94
PRKCH-222	ENST00000556778	KANSL1L	A0AUZ9	987 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	PRR33	A8MZF0	331 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778		I6L893	689 aa	Predicted RBP	9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	CBFA2T2	O43439	604 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	TRUB2	O95900	331 aa	Known RBP	9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	EGF	P01133	1207 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	JUND	P17535	347 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	RRM1	P23921	792 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	AVPR2	P30518	371 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	SLC6A4	P31645	630 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	CTH	P32929	405 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	OPRD1	P41143	372 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	PRKCI	P41743	596 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	SGSH	P51688	502 aa		9.18	□□□□□ -0.94
PRKCH-222	ENST00000556778	TBX4	P57082	545 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms