RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 NOCTQ9UK39 431 aaKnown RBP14.31□□□□□ -0.12
SHMT2-219ENST00000555563 DAAM1Q9Y4D1 1078 aa14.31□□□□□ -0.12
SHMT2-219ENST00000555563 FAM170AA1A519 330 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 PRR23AA6NEV1 266 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 PENKP01210 267 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-219ENST00000555563 MMEP08473 750 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 CHKAP35790 457 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 FNTBP49356 437 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 TBX4P57082 545 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 RING1Q06587 406 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 C2orf27AQ580R0 203 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 FYB2Q5VWT5 728 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 SYPL2Q5VXT5 272 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 HEATR6Q6AI08 1181 aaKnown RBP14.3□□□□□ -0.12
SHMT2-219ENST00000555563 OLFML1Q6UWY5 402 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 BEND5Q7L4P6 421 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 CPXM2Q8N436 756 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 TMEM35BQ8NCS4 154 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 ADAM32Q8TC27 787 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 SERPINB11Q96P15 392 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 HHIPQ96QV1 700 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 PDCL3Q9H2J4 239 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 SYNCQ9H7C4 482 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 POPDC2Q9HBU9 364 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 STOML2Q9UJZ1 356 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 MYO15AQ9UKN7 3530 aa14.3□□□□□ -0.12
SHMT2-219ENST00000555563 ZFHX2Q9C0A1 2572 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 A0A0A0MRY4 1105 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 CAPN9O14815 690 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 TEX33O43247 280 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 LILRB5O75023 590 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 GRAP2O75791 330 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 LATS1O95835 1130 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 HOXA6P31267 233 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 STAT1P42224 750 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 KIR2DL1P43626 348 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 NRLP54845 237 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 NNTQ13423 1086 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 DMC1Q14565 340 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 ZSCAN23Q3MJ62 389 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 C10orf76Q5T2E6 689 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 NUGGCQ68CJ6 796 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 SYT13Q7L8C5 426 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 LUZP1Q86V48 1076 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 CCDC33Q8N5R6 958 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 CCDC26Q8TAB7 109 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 ATRIPQ8WXE1 791 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 FCRL2Q96LA5 508 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 SLC2A13Q96QE2 648 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 XPO6Q96QU8 1125 aaKnown RBP14.29□□□□□ -0.12
SHMT2-219ENST00000555563 CBX8Q9HC52 389 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 ZDHHC4Q9NPG8 344 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 ASNSD1Q9NWL6 643 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 SLC8A2Q9UPR5 921 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 TLR6Q9Y2C9 796 aa14.29□□□□□ -0.12
SHMT2-219ENST00000555563 TBC1D3BA6NDS4 549 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 GFRA2O00451 464 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 IRAK2O43187 625 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 HSF2BPO75031 334 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 IGLV3-25P01717 112 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 CYBBP04839 570 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 GLI1P08151 1106 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 TIE1P35590 1138 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 TNFRSF4P43489 277 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 PXNP49023 591 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-219ENST00000555563 DGKGP49619 791 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 NOMO3P69849 1222 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 MRPS21P82921 87 aaKnown RBP14.28□□□□□ -0.12
SHMT2-219ENST00000555563 CDR2Q01850 454 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-219ENST00000555563 EMC10Q5UCC4 262 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 OR6B2Q6IFH4 312 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 ALLCQ8N6M5 410 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 IL17RCQ8NAC3 791 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 SLC39A13Q96H72 371 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
SHMT2-219ENST00000555563 PRRT4C9JH25 899 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 TSPAN3O60637 253 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 DAB1O75553 588 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 KLF8O95600 359 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 CISD3P0C7P0 127 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 HOXD9P28356 352 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SLC6A4P31645 630 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SLC11A2P49281 568 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SGSHP51688 502 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SNX16P57768 344 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 FMO1Q01740 532 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SLC6A3Q01959 620 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SRSF5Q13243 272 aaKnown RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SKOR2Q2VWA4 1001 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 HSF5Q4G112 596 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 DCAF6Q58WW2 860 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 FAM133BQ5BKY9 247 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms