RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CNBD2Q96M20 576 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 ZNF212Q9UDV6 495 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 TSPAN16Q9UKR8 245 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 E7ESA3 106 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 ACTR3P61158 418 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 KDELC2Q7Z4H8 507 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 FAM131BQ86XD5 332 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 NME8Q8N427 588 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 B4GALNT2Q8NHY0 566 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 SNRNP25Q9BV90 132 aaKnown RBP17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 MRPL4Q9BYD3 311 aaKnown RBP17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 TMEM216Q9P0N5 145 aa17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 ZNF214Q9UL59 606 aaPredicted RBP17.62■□□□□ 0.41
PPP4R3A-208ENST00000555462 GPR25O00155 361 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 KRT38O76015 456 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 MT-CO1P00395 513 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 BPGMP07738 259 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ADORA2BP29275 332 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ARL2P36404 184 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 NOMO1Q15155 1222 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 SPDYAQ5MJ70 313 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 TMEM198Q66K66 360 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 KCNT2Q6UVM3 1135 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ZBTB46Q86UZ6 589 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 RNF157Q96PX1 679 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 OGTO15294 1046 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 SIN3BO75182 1162 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 MRPS22P82650 360 aaKnown RBP17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 EFHC1Q5JVL4 640 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 MAVSQ7Z434 540 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 OR6Y1Q8NGX8 325 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ACO2Q99798 780 aaKnown RBP17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 RSAD1Q9HA92 442 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 KCNK4Q9NYG8 393 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 ADGRA2Q96PE1 1338 aa17.61■□□□□ 0.41
PPP4R3A-208ENST00000555462 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 APOL1O14791 398 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PPEF2O14830 753 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 TPH1P17752 444 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 GPD1P21695 349 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 IL4RP24394 825 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 TYK2P29597 1187 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 AVPR1AP37288 418 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 SLC18A1P54219 525 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 STXBP2Q15833 593 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 C11orf91Q3C1V1 193 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 WDR75Q8IWA0 830 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 NIM1KQ8IY84 436 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PPP4R1Q8TF05 950 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 CCDC106Q9BWC9 280 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 ASNSD1Q9NWL6 643 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 RHBDL2Q9NX52 303 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 SOX13Q9UN79 622 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 CREB3O43889 395 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 VTNP04004 478 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 MED21Q13503 144 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 WDR49Q8IV35 697 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PLD6Q8N2A8 252 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 FAM149B1Q96BN6 582 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 ATP9BO43861 1147 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 RPS6KA3P51812 740 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PDE1CQ14123 709 aaPredicted RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 CTU1Q7Z7A3 348 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 SDCCAG8Q86SQ7 713 aaPredicted RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 CMASQ8NFW8 434 aaPredicted RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 SGF29Q96ES7 293 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 NDNQ99608 321 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 RPF1Q9H9Y2 349 aaKnown RBP17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PICK1Q9NRD5 415 aa17.6■□□□□ 0.41
PPP4R3A-208ENST00000555462 PAPSS1O43252 624 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 FGFR3P22607 806 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 COPAP53621 1224 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 IRF9Q00978 393 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 CCDC14Q49A88 953 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 MTHFD1LQ6UB35 978 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 CHSY1Q86X52 802 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 ZNF398Q8TD17 642 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 GMLQ99445 158 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 ATG7O95352 703 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 ALDOAP04075 364 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 CYP2F1P24903 491 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 EPHA3P29320 983 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 BAG6P46379 1132 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 BACE1P56817 501 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TBL3Q12788 808 aaKnown RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 MSLNQ13421 630 aaPredicted RBP17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 CCNIQ14094 377 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 GOLGA7BQ2TAP0 167 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TEX44Q53QW1 395 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 LGSNQ5TDP6 509 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 FBXL19Q6PCT2 694 aa17.59■□□□□ 0.41
PPP4R3A-208ENST00000555462 TTC16Q8NEE8 873 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms