RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 VDRP11473 427 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 ALADP13716 330 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 PARP6Q2NL67 630 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 LPCAT4Q643R3 524 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 RWDD4Q6NW29 188 aaKnown RBP12.25□□□□□ -0.45
XRCC3-208ENST00000554811 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 LRRC4Q9HBW1 653 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 TUBGCP4Q9UGJ1 667 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
XRCC3-208ENST00000554811 hCG_2014768A0A024R1R8 64 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 PAPSS1O43252 624 aaPredicted RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SKIV2L2P42285 1042 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 GPD2P43304 727 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SLC34A1Q06495 639 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 BIRC2Q13490 618 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CCDC14Q49A88 953 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 TRNP1Q6NT89 227 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 TDRPQ86YL5 185 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 REPS2Q8NFH8 660 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 GPR20Q99678 358 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SMARCAD1Q9H4L7 1026 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 ZNFX1Q9P2E3 1918 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 DNAJC6O75061 913 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 PSMB4P28070 264 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 ZNF132P52740 706 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 BTKQ06187 659 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 TTLL4Q14679 1199 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 DLG2Q15700 870 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 DPP9Q86TI2 863 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CDKL3Q8IVW4 592 aaPredicted RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CCDC185Q8N715 623 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CHST13Q8NET6 341 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 EXT2Q93063 718 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 FAM136AQ96C01 138 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CELF6Q96J87 481 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 C10orf71Q711Q0 1435 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 CILPO75339 1184 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 ATP6V1C1P21283 382 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SEPT6Q14141 434 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 SLC10A6Q3KNW5 377 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 WASHC2DQ5SRD0 308 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 DEFB107AQ8IZN7 70 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 PIN4Q9Y237 131 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 FNDC3AQ9Y2H6 1198 aaKnown RBP12.24□□□□□ -0.45
XRCC3-208ENST00000554811 PSAT1Q9Y617 370 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 ADGRA2Q96PE1 1338 aa12.24□□□□□ -0.45
XRCC3-208ENST00000554811 C3orf70A6NLC5 250 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 LMNAP02545 664 aaKnown RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ENO3P13929 434 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ADCYAP1R1P41586 468 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 AP2B1P63010 937 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 BLMHQ13867 455 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 MCUQ8NE86 351 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PHACTR1Q9C0D0 580 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ATXN3LQ9H3M9 355 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 NRDE2Q9H7Z3 1164 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 EURLQ9NYK6 297 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SLC39A10Q9ULF5 831 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 FOCADQ5VW36 1801 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 M0QYT0 321 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PITX1P78337 314 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 GEN1Q17RS7 908 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PTAR1Q7Z6K3 402 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 C10orf107Q8IVU9 208 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ULK2Q8IYT8 1036 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SIX6OS1Q8N1H7 587 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 GSDMBQ8TAX9 411 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SLC7A14Q8TBB6 771 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 EDEM1Q92611 657 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 FAXDC2Q96IV6 333 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 C20orf27Q9GZN8 174 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 PLLPQ9Y342 182 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 STYXL1Q9Y6J8 313 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 KIAA1217Q5T5P2 1943 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 RNF103O00237 685 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 AP1G2O75843 785 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 DLDP09622 509 aaKnown RBP12.23□□□□□ -0.45
XRCC3-208ENST00000554811 SLC1A6P48664 564 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 POU5F1BQ06416 359 aa12.23□□□□□ -0.45
XRCC3-208ENST00000554811 CACNB2Q08289 660 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms