RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UBL4BQ8N7F7 174 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 FAM133AQ8N9E0 248 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 RCBTB1Q8NDN9 531 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 TMEM174Q8WUU8 243 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 UBLCP1Q8WVY7 318 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MAIP1Q8WWC4 291 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CTNNBL1Q8WYA6 563 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 ZNF669Q96BR6 464 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 GRAMD1AQ96CP6 724 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 FAM20AQ96MK3 541 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MBOAT7Q96N66 472 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 AARSD1Q9BTE6 412 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 KCTD10Q9H3F6 313 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 PLEKHA4Q9H4M7 779 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 PPCSQ9HAB8 311 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 SLC40A1Q9NP59 571 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 OLFML3Q9NRN5 406 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 DDX25Q9UHL0 483 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MCM8Q9UJA3 840 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 MTUS1Q9ULD2 1270 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 CEP83Q9Y592 693 aa6.26□□□□□ -1.41
VPS33B-203ENST00000554264 COL11A1P12107 1806 aaPredicted RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 TCF20Q9UGU0 1960 aaKnown RBP6.26□□□□□ -1.41
VPS33B-203ENST00000554264 BAZ2BQ9UIF8 2168 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 LRRC37A2A6NM11 1700 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 BDP1A6H8Y1 2624 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 BLACEA4D250 179 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 OR14I1A6ND48 311 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 CCT8L1PA6NM43 557 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 NUDT19A8MXV4 375 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 LIN7AO14910 233 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 P4HA2O15460 535 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PRODHO43272 600 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TBCAO75347 108 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 ATP5HO75947 161 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TTLL1O95922 423 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 FTCDO95954 541 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 DBHP09172 617 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 FAM153BP0C7A2 387 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PLA2G4BP0C869 781 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 ECHS1P30084 290 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 HPDP32754 393 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 MMP13P45452 471 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 CPT1AP50416 773 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 JAM2P57087 298 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 SNRPFP62306 86 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 DR1Q01658 176 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 CNTN2Q02246 1040 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 BFSP2Q13515 415 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TESK1Q15569 626 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 LEXMQ3ZCV2 418 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 CCDC38Q502W7 563 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 BRDTQ58F21 947 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 HERC4Q5GLZ8 1057 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 SPDYAQ5MJ70 313 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PPP1R2P3Q6NXS1 205 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TRMT10CQ7L0Y3 403 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 EPM2AIP1Q7L775 607 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 IRF2BP2Q7Z5L9 587 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 DAAM2Q86T65 1068 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 NT5DC3Q86UY8 548 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 GPBP1Q86WP2 473 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 HERC6Q8IVU3 1022 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 KLHL7Q8IXQ5 586 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 BBOF1Q8ND07 529 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 GMCL1P1Q8NEA9 526 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PLEKHO2Q8TD55 490 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 CCT6BQ92526 530 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 SLCO2A1Q92959 643 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 MKL1Q969V6 931 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 FAM81BQ96LP2 452 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 XPO6Q96QU8 1125 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 RPS6KC1Q96S38 1066 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PLIN2Q99541 437 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 ERP44Q9BS26 406 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 SGPP1Q9BX95 441 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 STK33Q9BYT3 514 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TXLNGYQ9BZA5 131 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 RXFP1Q9HBX9 757 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 VTA1Q9NP79 307 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 NLRC4Q9NPP4 1024 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 HOMER2Q9NSB8 354 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 RNF146Q9NTX7 359 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TRMT13Q9NUP7 481 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PCYOX1Q9UHG3 505 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 ODF2LQ9ULJ1 636 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 RPL26L1Q9UNX3 145 aaKnown RBP6.25□□□□□ -1.41
VPS33B-203ENST00000554264 TFR2Q9UP52 801 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 DNM3Q9UQ16 869 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 PCDHA2Q9Y5H9 948 aa6.25□□□□□ -1.41
VPS33B-203ENST00000554264 GBF1Q92538 1859 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 TRBV23OR9-2A0A075B6M9 112 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-203ENST00000554264 LOC102724159A0A0B4J2E5 919 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 ANKRD62A6NC57 917 aa6.24□□□□□ -1.41
VPS33B-203ENST00000554264 E7ENQ6 273 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms