RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 AP1G1O43747 822 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 F11P03951 625 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 AMHP03971 560 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 RFC1P35251 1148 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CASP4P49662 377 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 MMP16P51512 607 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 YBEYP58557 167 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 DAOAP59103 153 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PSMA6P60900 246 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 LAMB3Q13751 1172 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GRM3Q14832 879 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TM4SF20Q53R12 229 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 BOLA3Q53S33 107 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 NOMO2Q5JPE7 1267 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PCGF5Q86SE9 256 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SETD3Q86TU7 594 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 RALGPS2Q86X27 583 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TPH2Q8IWU9 490 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 DCP1BQ8IZD4 617 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 EFHBQ8N7U6 833 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TTC8Q8TAM2 541 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ROPN1BQ9BZX4 212 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 RSAD1Q9HA92 442 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ROPN1Q9HAT0 212 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ST3GAL5Q9UNP4 418 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 FHOD1Q9Y613 1164 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 KPNA7A9QM74 516 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 H0YGN5 161 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PSMD11O00231 422 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PODXLO00592 558 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ONECUT2O95948 504 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GSRP00390 522 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CYC1P08574 325 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CR2P20023 1033 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 MARK3P27448 753 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CDKN2BP42772 138 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 LIG4P49917 911 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CLCN4P51793 760 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PEX3P56589 373 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SLC20A2Q08357 652 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 FCHO2Q0JRZ9 810 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GALNT1Q10472 559 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 DCAF12L1Q5VU92 463 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 EEF1DP3Q658K8 133 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 C4orf50Q6ZRC1 276 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 BPHLQ86WA6 291 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CBWD2Q8IUF1 395 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM199Q8N511 208 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 FEZF2Q8TBJ5 459 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 OIT3Q8WWZ8 545 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM74Q96NL1 305 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ASPSCR1Q9BZE9 553 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PADI3Q9ULW8 664 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 JAG2Q9Y219 1238 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PLAAQ9Y263 795 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 NFS1Q9Y697 457 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 GPR89AB7ZAQ6 455 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 GOLGA6L19H0YKK7 550 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRAPPC3O43617 180 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 KRT86O43790 486 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 GCNT3O95395 438 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 GPR89BP0CG08 455 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 POLR2BP30876 1174 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 VCPP55072 806 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 NFKB2Q00653 900 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 PPIDQ08752 370 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 DRAP1Q14919 205 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 NOMO1Q15155 1222 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 LINC01559Q495D7 138 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SPATS1Q496A3 300 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 MSS51Q4VC12 460 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF618Q5T7W0 954 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM150AQ86TG1 271 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ZSWIM9Q86XI8 627 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CHAC2Q8WUX2 184 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 NTNG2Q96CW9 530 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 IGSF21Q96ID5 467 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 FCRL2Q96LA5 508 aaPredicted RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 NT5C1AQ9BXI3 368 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 B3GNT5Q9BYG0 378 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CDH19Q9H159 772 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 VPS18Q9P253 973 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SHOC2Q9UQ13 582 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRBV5-4A0A0C4DH59 114 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TRIM43BA6NCK2 446 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 DCDC2CA8MYV0 355 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ERVH48-1M5A8F1 160 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 KLF11O14901 512 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 AKAP10O43572 662 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 TNFRSF21O75509 655 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 SRPRAP08240 638 aaKnown RBP5.1□□□□□ -1.59
SCAF11-212ENST00000549162 KRT7P08729 469 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 ACTN1P12814 892 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 HADHAP40939 763 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 DLG4P78352 724 aa5.1□□□□□ -1.59
SCAF11-212ENST00000549162 CDKN3Q16667 212 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms