RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TBX4P57082 545 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 MEA1Q16626 185 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 OR6B2Q6IFH4 312 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 MSANTD2Q6P1R3 559 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 FAM183BPQ6ZVS7 135 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 TMEM110Q86TL2 294 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 NOP9Q86U38 636 aaKnown RBP16.45■□□□□ 0.22
DDX54-205ENST00000548786 TAC4Q86UU9 113 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 TXNDC5Q8NBS9 432 aaKnown RBP16.45■□□□□ 0.22
DDX54-205ENST00000548786 DDI1Q8WTU0 396 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 FAM126AQ9BYI3 521 aaPredicted RBP16.45■□□□□ 0.22
DDX54-205ENST00000548786 MARK1Q9P0L2 795 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 COX16Q9P0S2 106 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
DDX54-205ENST00000548786 RIF1Q5UIP0 2472 aaKnown RBP16.44■□□□□ 0.22
DDX54-205ENST00000548786 GOLGA6L7A0A1B0GV03 622 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 MOCS2O96007 188 aaPredicted RBP16.44■□□□□ 0.22
DDX54-205ENST00000548786 CHKAP35790 457 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 DGKGP49619 791 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 ZNF165P49910 485 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 BPIFB4P59827 614 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 PITX1P78337 314 aaPredicted RBP16.44■□□□□ 0.22
DDX54-205ENST00000548786 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 C2CD6Q53TS8 623 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 FYB2Q5VWT5 728 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 RFWD3Q6PCD5 774 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 SYT13Q7L8C5 426 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 LONP2Q86WA8 852 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 IL17RCQ8NAC3 791 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 SPAG5Q96R06 1193 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 LHX5Q9H2C1 402 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 CLEC4EQ9ULY5 219 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 SMG5Q9UPR3 1016 aaKnown RBP16.44■□□□□ 0.22
DDX54-205ENST00000548786 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 GPR179Q6PRD1 2367 aa16.44■□□□□ 0.22
DDX54-205ENST00000548786 PRRT4C9JH25 899 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 SGK1O00141 431 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 HRO43593 1189 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 LILRB5O75023 590 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 PENKP01210 267 aaPredicted RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 CYBBP04839 570 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 MMEP08473 750 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 KIR2DL1P43626 348 aaPredicted RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 SGSHP51688 502 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 YWHAZP63104 245 aaKnown RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 ARID5AQ03989 594 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 DCAF6Q58WW2 860 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 EGFLAMQ63HQ2 1017 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 APTXQ7Z2E3 356 aaKnown RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 DCLK2Q8N568 766 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 ZNF513Q8N8E2 541 aaPredicted RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 TSTD1Q8NFU3 115 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 EPS8L1Q8TE68 723 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
DDX54-205ENST00000548786 TPSD1Q9BZJ3 242 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 FAM204AQ9H8W3 233 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 MMP17Q9ULZ9 603 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 INVSQ9Y283 1065 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 CFAP54Q96N23 3096 aa16.43■□□□□ 0.22
DDX54-205ENST00000548786 ZNF292O60281 2723 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 SMTNL1A8MU46 457 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 TEX33O43247 280 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 APBB3O95704 486 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 IGLV3-27P01718 113 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 CISD3P0C7P0 127 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 CHRM1P11229 460 aaPredicted RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX54-205ENST00000548786 RNASE9P60153 205 aaKnown RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 MRPS21P82921 87 aaKnown RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 SIM2Q14190 667 aaPredicted RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 PREPLQ4J6C6 727 aaPredicted RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 NAA35Q5VZE5 725 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 ANO7Q6IWH7 933 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 CEP68Q76N32 757 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 WDR5BQ86VZ2 330 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 DEFB106AQ8N104 65 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 CPXM2Q8N436 756 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 SUMF1Q8NBK3 374 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 CPA5Q8WXQ8 436 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 DDX1Q92499 740 aaKnown RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 FCRL2Q96LA5 508 aaPredicted RBP16.42■□□□□ 0.22
DDX54-205ENST00000548786 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 ACOX2Q99424 681 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 FUCA2Q9BTY2 467 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 SEMA4AQ9H3S1 761 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 NCDNQ9UBB6 729 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 HCN2Q9UL51 889 aa16.42■□□□□ 0.22
DDX54-205ENST00000548786 EP300Q09472 2414 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms