RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CCR1P32246 355 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 CXCR5P32302 372 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 TBX4P57082 545 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 PPP2R5DQ14738 602 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 ARL13BQ3SXY8 428 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 BRMS1LQ5PSV4 323 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 RARS2Q5T160 578 aaKnown RBP29.9■■■□□ 2.38
BRF1-213ENST00000548421 DCAF12L1Q5VU92 463 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 TXNDC8Q6A555 127 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 HSPH1Q92598 858 aa29.9■■■□□ 2.38
BRF1-213ENST00000548421 HBS1LQ9Y450 684 aaKnown RBP29.9■■■□□ 2.38
BRF1-213ENST00000548421 SLC12A8A0AV02 714 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 ZNF197O14709 1029 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 URI1O94763 535 aaPredicted RBP29.89■■■□□ 2.38
BRF1-213ENST00000548421 OLFM2O95897 454 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 KRT1P04264 644 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 HOXB8P17481 243 aaPredicted RBP29.89■■■□□ 2.38
BRF1-213ENST00000548421 DDX6P26196 483 aaKnown RBP eCLIP29.89■■■□□ 2.38
BRF1-213ENST00000548421 NTHL1P78549 312 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 ARHGAP15Q53QZ3 475 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 ODF2Q5BJF6 829 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 PRSS36Q5K4E3 855 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 PSTKQ8IV42 348 aaKnown RBP29.89■■■□□ 2.38
BRF1-213ENST00000548421 EXD1Q8NHP7 514 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 ACSF2Q96CM8 615 aaPredicted RBP29.89■■■□□ 2.38
BRF1-213ENST00000548421 TCEAL4Q96EI5 215 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 SLC39A13Q96H72 371 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 PBKQ96KB5 322 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 RNF38Q9H0F5 515 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 KLHL11Q9NVR0 708 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.89■■■□□ 2.38
BRF1-213ENST00000548421 FZD10Q9ULW2 581 aa29.89■■■□□ 2.38
BRF1-213ENST00000548421 CES2O00748 559 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 SLC2A3P11169 496 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 GJA1P17302 382 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 SLC5A9Q2M3M2 681 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 ZC3H12AQ5D1E8 599 aaKnown RBP29.88■■■□□ 2.37
BRF1-213ENST00000548421 TKTL2Q9H0I9 626 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 STAU2Q9NUL3 570 aaKnown RBP eCLIP29.88■■■□□ 2.37
BRF1-213ENST00000548421 ARHGEF38Q9NXL2 777 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 AP4E1Q9UPM8 1137 aa29.88■■■□□ 2.37
BRF1-213ENST00000548421 NRG2O14511 850 aaPredicted RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 SRGAP2O75044 1071 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 MOSPD3O75425 235 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 ZRANB2O95218 330 aaKnown RBP eCLIP29.87■■■□□ 2.37
BRF1-213ENST00000548421 HDCP19113 662 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 ADRA1BP35368 520 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 RING1Q06587 406 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 SCAPQ12770 1279 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 SYCE2Q6PIF2 218 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 GPR149Q86SP6 731 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 MAB21L3Q8N8X9 362 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 RBM41Q96IZ5 413 aaKnown RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 FCRL2Q96LA5 508 aaPredicted RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 CLUHO75153 1309 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 HELZP42694 1942 aaKnown RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 TRAV19A0A0A6YYK7 116 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 SOBPA7XYQ1 873 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 IGLV3-27P01718 113 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 PYGMP11217 842 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 MBL2P11226 248 aaPredicted RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 COG7P83436 770 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 TEAD2Q15562 447 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 CTC1Q2NKJ3 1217 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 EFHC2Q5JST6 749 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 RCOR2Q8IZ40 523 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 ARL14EPQ8N8R7 260 aaPredicted RBP29.87■■■□□ 2.37
BRF1-213ENST00000548421 COG1Q8WTW3 980 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 SLC22A12Q96S37 553 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 GPATCH2LQ9NWQ4 482 aa29.87■■■□□ 2.37
BRF1-213ENST00000548421 APOEP02649 317 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 ZNF211Q13398 564 aaPredicted RBP29.86■■■□□ 2.37
BRF1-213ENST00000548421 STXBP5Q5T5C0 1151 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 GPR158Q5T848 1215 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 SEL1L2Q5TEA6 688 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 GPR153Q6NV75 609 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 KCTD6Q8NC69 237 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 RAPGEF5Q92565 580 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 CYP2S1Q96SQ9 504 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 ANLNQ9NQW6 1124 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 CLDND1Q9NY35 253 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 CLEC1BQ9P126 229 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 ZMYM5Q9UJ78 669 aa29.86■■■□□ 2.37
BRF1-213ENST00000548421 MRPS23Q9Y3D9 190 aaKnown RBP29.86■■■□□ 2.37
BRF1-213ENST00000548421 LRRD1A4D1F6 860 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 KCNU1A8MYU2 1149 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 CKMP06732 381 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 HMBSP08397 361 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 TUBB2AQ13885 445 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 DPYSL2Q16555 572 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 CCDC50Q8IVM0 306 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 PLD4Q96BZ4 506 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 TUBB2BQ9BVA1 445 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 APOL5Q9BWW9 433 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 KLF16Q9BXK1 252 aaPredicted RBP29.85■■■□□ 2.37
BRF1-213ENST00000548421 DHX35Q9H5Z1 703 aaKnown RBP29.85■■■□□ 2.37
BRF1-213ENST00000548421 TASP1Q9H6P5 420 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 TMPRSS4Q9NRS4 437 aa29.85■■■□□ 2.37
BRF1-213ENST00000548421 PI4K2BG5E9Z4 385 aa29.84■■■□□ 2.37
BRF1-213ENST00000548421 ZNF185O15231 689 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms