RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 CCSER2Q9H7U1 834 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 PRDM16Q9HAZ2 1276 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 PIDD1Q9HB75 910 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.07■□□□□ 0.48
LETMD1-215ENST00000548390 ARHGEF38Q9NXL2 777 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 COX16Q9P0S2 106 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 RCOR3Q9P2K3 495 aaPredicted RBP18.07■□□□□ 0.48
LETMD1-215ENST00000548390 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 FZD10Q9ULW2 581 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 AP4E1Q9UPM8 1137 aa18.07■□□□□ 0.48
LETMD1-215ENST00000548390 GREB1Q4ZG55 1949 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 LRRD1A4D1F6 860 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 PGRMC1O00264 195 aaKnown RBP18.06■□□□□ 0.48
LETMD1-215ENST00000548390 COCHO43405 550 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 SRGAP2O75044 1071 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 OLFM2O95897 454 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 RHOP08100 348 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 PYGMP11217 842 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 KDELR1P24390 212 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 ATXN1P54253 815 aaKnown RBP18.06■□□□□ 0.48
LETMD1-215ENST00000548390 HYAL1Q12794 435 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 KRT81Q14533 505 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 SMTNL2Q2TAL5 461 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 KCNT1Q5JUK3 1230 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF697Q5TEC3 545 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 TXNRD3NBQ6F5E7 133 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 GAREM2Q75VX8 874 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 CCDC50Q8IVM0 306 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 UNC45BQ8IWX7 931 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 HS6ST3Q8IZP7 471 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 CEP112Q8N8E3 955 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 PLD4Q96BZ4 506 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF707Q96C28 371 aaPredicted RBP18.06■□□□□ 0.48
LETMD1-215ENST00000548390 TKTL2Q9H0I9 626 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 PRDM12Q9H4Q4 367 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
LETMD1-215ENST00000548390 NUDT5Q9UKK9 219 aa18.06■□□□□ 0.48
LETMD1-215ENST00000548390 TRAV19A0A0A6YYK7 116 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 SLC12A8A0AV02 714 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 KCNU1A8MYU2 1149 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 TBX18O95935 607 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 IGLV3-27P01718 113 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 HTR7P34969 479 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 ARSEP51690 589 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 CDH6P55285 790 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 TAZQ16635 292 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 RAB6CQ53S08 254 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 TFDP3Q5H9I0 405 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 SPOCD1Q6ZMY3 1216 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 CCDC185Q8N715 623 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 ATP6V0D2Q8N8Y2 350 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 VN1R2Q8NFZ6 395 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 SMG7Q92540 1137 aaKnown RBP18.05■□□□□ 0.48
LETMD1-215ENST00000548390 RAPGEF5Q92565 580 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 FCRL2Q96LA5 508 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF670Q9BS34 389 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 RAB6CQ9H0N0 254 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 OSBPL2Q9H1P3 480 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-215ENST00000548390 IGFLR1Q9H665 355 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 LAMA2P24043 3122 aaKnown RBP18.05■□□□□ 0.48
LETMD1-215ENST00000548390 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 MYO16Q9Y6X6 1858 aa18.05■□□□□ 0.48
LETMD1-215ENST00000548390 TNRC18O15417 2968 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-215ENST00000548390 MTCL1Q9Y4B5 1905 aaKnown RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 A0A1W2PRU2 124 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF185O15231 689 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 MSI1O43347 362 aaKnown RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 HDCP19113 662 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ARL4AP40617 200 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 SLC7A9P82251 487 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF211Q13398 564 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ATP13A4Q4VNC1 1196 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ZC3H12AQ5D1E8 599 aaKnown RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 ZNF572Q7Z3I7 529 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 SLC13A5Q86YT5 568 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 AZIN2Q96A70 460 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 RNF25Q96BH1 459 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 BTN2A3PQ96KV6 586 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 CAPZA3Q96KX2 299 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 C1orf74Q96LT6 269 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 OSBPL8Q9BZF1 889 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 DHX35Q9H5Z1 703 aaKnown RBP18.04■□□□□ 0.48
LETMD1-215ENST00000548390 PCDH18Q9HCL0 1135 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 TRPC7Q9HCX4 862 aa18.04■□□□□ 0.48
LETMD1-215ENST00000548390 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 C2orf78A6NCI8 922 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 C3orf70A6NLC5 250 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-215ENST00000548390 H3BRJ5 948 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 TJP3O95049 919 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 LATS1O95835 1130 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 FGGP02679 453 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
LETMD1-215ENST00000548390 L1CAMP32004 1257 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 CDKN2BP42772 138 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 HCAR3P49019 387 aa18.03■□□□□ 0.48
LETMD1-215ENST00000548390 HARS2P49590 506 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms