RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SIGLEC16A6NMB1 481 aa15.07■□□□□ 0
DDX54-203ENST00000546869 NCAM2O15394 837 aa15.07■□□□□ 0
DDX54-203ENST00000546869 IRAK2O43187 625 aa15.07■□□□□ 0
DDX54-203ENST00000546869 HOXC11O43248 304 aaPredicted RBP15.07■□□□□ 0
DDX54-203ENST00000546869 MFAP3LO75121 409 aa15.07■□□□□ 0
DDX54-203ENST00000546869 RTN2O75298 545 aa15.07■□□□□ 0
DDX54-203ENST00000546869 ENDOD1O94919 500 aa15.07■□□□□ 0
DDX54-203ENST00000546869 F9P00740 461 aa15.07■□□□□ 0
DDX54-203ENST00000546869 NUBP1P53384 320 aa15.07■□□□□ 0
DDX54-203ENST00000546869 GAD2Q05329 585 aa15.07■□□□□ 0
DDX54-203ENST00000546869 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
DDX54-203ENST00000546869 TSR1Q2NL82 804 aaKnown RBP15.07■□□□□ 0
DDX54-203ENST00000546869 GAB4Q2WGN9 574 aa15.07■□□□□ 0
DDX54-203ENST00000546869 SLC25A52Q3SY17 297 aa15.07■□□□□ 0
DDX54-203ENST00000546869 C2CD6Q53TS8 623 aa15.07■□□□□ 0
DDX54-203ENST00000546869 LY6G5CQ5SRR4 150 aa15.07■□□□□ 0
DDX54-203ENST00000546869 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
DDX54-203ENST00000546869 WDR59Q6PJI9 974 aa15.07■□□□□ 0
DDX54-203ENST00000546869 BNIPLQ7Z465 357 aa15.07■□□□□ 0
DDX54-203ENST00000546869 TAC4Q86UU9 113 aa15.07■□□□□ 0
DDX54-203ENST00000546869 SUGP1Q8IWZ8 645 aaKnown RBP15.07■□□□□ 0
DDX54-203ENST00000546869 TTC16Q8NEE8 873 aa15.07■□□□□ 0
DDX54-203ENST00000546869 CLDN23Q96B33 292 aa15.07■□□□□ 0
DDX54-203ENST00000546869 CHFRQ96EP1 664 aa15.07■□□□□ 0
DDX54-203ENST00000546869 FCRL2Q96LA5 508 aaPredicted RBP15.07■□□□□ 0
DDX54-203ENST00000546869 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
DDX54-203ENST00000546869 LTB4R2Q9NPC1 389 aa15.07■□□□□ 0
DDX54-203ENST00000546869 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
DDX54-203ENST00000546869 ARHGAP20Q9P2F6 1191 aa15.07■□□□□ 0
DDX54-203ENST00000546869 ADAMTS1Q9UHI8 967 aa15.07■□□□□ 0
DDX54-203ENST00000546869 SSU72P8A0A1W2PR75 194 aa15.06■□□□□ 0
DDX54-203ENST00000546869 AKR1B15C9JRZ8 316 aaPredicted RBP15.06■□□□□ 0
DDX54-203ENST00000546869 GFRA2O00451 464 aa15.06■□□□□ 0
DDX54-203ENST00000546869 MSI1O43347 362 aaKnown RBP15.06■□□□□ 0
DDX54-203ENST00000546869 GRAP2O75791 330 aa15.06■□□□□ 0
DDX54-203ENST00000546869 PDGFBP01127 241 aaPredicted RBP15.06■□□□□ 0
DDX54-203ENST00000546869 HMBSP08397 361 aa15.06■□□□□ 0
DDX54-203ENST00000546869 KRT3P12035 628 aa15.06■□□□□ 0
DDX54-203ENST00000546869 MAGEA9P43362 315 aa15.06■□□□□ 0
DDX54-203ENST00000546869 RPS9P46781 194 aaKnown RBP15.06■□□□□ 0
DDX54-203ENST00000546869 FZD5Q13467 585 aa15.06■□□□□ 0
DDX54-203ENST00000546869 PPP2R5DQ14738 602 aa15.06■□□□□ 0
DDX54-203ENST00000546869 TDRD12Q587J7 1177 aaKnown RBP15.06■□□□□ 0
DDX54-203ENST00000546869 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
DDX54-203ENST00000546869 ADGRF1Q5T601 910 aa15.06■□□□□ 0
DDX54-203ENST00000546869 CWF19L1Q69YN2 538 aaKnown RBP15.06■□□□□ 0
DDX54-203ENST00000546869 TMC6Q7Z403 805 aa15.06■□□□□ 0
DDX54-203ENST00000546869 DENND1CQ8IV53 801 aa15.06■□□□□ 0
DDX54-203ENST00000546869 SYNPOQ8N3V7 929 aa15.06■□□□□ 0
DDX54-203ENST00000546869 PJA1Q8NG27 643 aa15.06■□□□□ 0
DDX54-203ENST00000546869 TRIM11Q96F44 468 aa15.06■□□□□ 0
DDX54-203ENST00000546869 ZNHIT6Q9NWK9 470 aaKnown RBP15.06■□□□□ 0
DDX54-203ENST00000546869 TAS2R14Q9NYV8 317 aa15.06■□□□□ 0
DDX54-203ENST00000546869 SIT1Q9Y3P8 196 aa15.06■□□□□ 0
DDX54-203ENST00000546869 FAM86C2PA6NEL3 165 aa15.05■□□□□ -0
DDX54-203ENST00000546869 FAM170BA6NMN3 283 aa15.05■□□□□ -0
DDX54-203ENST00000546869 KCNU1A8MYU2 1149 aa15.05■□□□□ -0
DDX54-203ENST00000546869 GOLGA8SH3BPF8 625 aa15.05■□□□□ -0
DDX54-203ENST00000546869 ACSL4O60488 711 aa15.05■□□□□ -0
DDX54-203ENST00000546869 PENKP01210 267 aaPredicted RBP15.05■□□□□ -0
DDX54-203ENST00000546869 FTLP02792 175 aaPredicted RBP15.05■□□□□ -0
DDX54-203ENST00000546869 MYBL1P10243 752 aa15.05■□□□□ -0
DDX54-203ENST00000546869 ADH5P11766 374 aa15.05■□□□□ -0
DDX54-203ENST00000546869 CCR1P32246 355 aa15.05■□□□□ -0
DDX54-203ENST00000546869 FLT3P36888 993 aa15.05■□□□□ -0
DDX54-203ENST00000546869 PTPN9P43378 593 aa15.05■□□□□ -0
DDX54-203ENST00000546869 SOX9P48436 509 aa15.05■□□□□ -0
DDX54-203ENST00000546869 SLC11A2P49281 568 aa15.05■□□□□ -0
DDX54-203ENST00000546869 GALK1P51570 392 aa15.05■□□□□ -0
DDX54-203ENST00000546869 RNASE9P60153 205 aaKnown RBP15.05■□□□□ -0
DDX54-203ENST00000546869 ASTE1Q2TB18 679 aaPredicted RBP15.05■□□□□ -0
DDX54-203ENST00000546869 PREPLQ4J6C6 727 aaPredicted RBP15.05■□□□□ -0
DDX54-203ENST00000546869 TMEM196Q5HYL7 178 aa15.05■□□□□ -0
DDX54-203ENST00000546869 DGKKQ5KSL6 1271 aa15.05■□□□□ -0
DDX54-203ENST00000546869 ACBD5Q5T8D3 534 aaPredicted RBP15.05■□□□□ -0
DDX54-203ENST00000546869 PLEKHA7Q6IQ23 1121 aa15.05■□□□□ -0
DDX54-203ENST00000546869 TXNDC11Q6PKC3 985 aa15.05■□□□□ -0
DDX54-203ENST00000546869 MAMSTRQ6ZN01 415 aa15.05■□□□□ -0
DDX54-203ENST00000546869 TMEM25Q86YD3 366 aa15.05■□□□□ -0
DDX54-203ENST00000546869 FLCNQ8NFG4 579 aa15.05■□□□□ -0
DDX54-203ENST00000546869 TTC8Q8TAM2 541 aa15.05■□□□□ -0
DDX54-203ENST00000546869 ADAM32Q8TC27 787 aa15.05■□□□□ -0
DDX54-203ENST00000546869 BTN2A3PQ96KV6 586 aa15.05■□□□□ -0
DDX54-203ENST00000546869 P2RY13Q9BPV8 354 aa15.05■□□□□ -0
DDX54-203ENST00000546869 DDX50Q9BQ39 737 aaKnown RBP15.05■□□□□ -0
DDX54-203ENST00000546869 DLGAP2Q9P1A6 1054 aa15.05■□□□□ -0
DDX54-203ENST00000546869 SLC12A6Q9UHW9 1150 aa15.05■□□□□ -0
DDX54-203ENST00000546869 FBXO10Q9UK96 956 aa15.05■□□□□ -0
DDX54-203ENST00000546869 NENFQ9UMX5 172 aa15.05■□□□□ -0
DDX54-203ENST00000546869 PAXBP1Q9Y5B6 917 aa15.05■□□□□ -0
DDX54-203ENST00000546869 A0A087X0T9 212 aa15.04■□□□□ -0
DDX54-203ENST00000546869 C2CD4BA6NLJ0 364 aa15.04■□□□□ -0
DDX54-203ENST00000546869 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.04■□□□□ -0
DDX54-203ENST00000546869 M0QYT0 321 aa15.04■□□□□ -0
DDX54-203ENST00000546869 APOEP02649 317 aa15.04■□□□□ -0
DDX54-203ENST00000546869 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
DDX54-203ENST00000546869 FAM228BP0C875 321 aa15.04■□□□□ -0
DDX54-203ENST00000546869 DRD1P21728 446 aa15.04■□□□□ -0
DDX54-203ENST00000546869 CD72P21854 359 aa15.04■□□□□ -0
DDX54-203ENST00000546869 RRM1P23921 792 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms