RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RUNX3Q13761 415 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 SPA17Q15506 151 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 ITPRIPL2Q3MIP1 535 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 SLC44A4Q53GD3 710 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 PLEKHA7Q6IQ23 1121 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 H2AFVQ71UI9 128 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 TAC4Q86UU9 113 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 CPA6Q8N4T0 437 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 ATP6V0D2Q8N8Y2 350 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 CTNNBL1Q8WYA6 563 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-213ENST00000546820 NT5C3BQ969T7 300 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 EXOC4Q96A65 974 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 PGAP3Q96FM1 320 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-213ENST00000546820 SHDQ96IW2 340 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 ZFYVE19Q96K21 471 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-213ENST00000546820 EBF3Q9H4W6 596 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 WDCPQ9H6R7 721 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-213ENST00000546820 WNT6Q9Y6F9 365 aa14.33□□□□□ -0.12
PTCH1-213ENST00000546820 SYNJ2BP-COX16A0A087WUM0 186 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 C2CD4BA6NLJ0 364 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 PI4K2BG5E9Z4 385 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 IRAK2O43187 625 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 NRDCO43847 1150 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 IGLV3-25P01717 112 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 IGLV3-27P01718 113 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 FLT3P36888 993 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 GALCP54803 685 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 EML3Q32P44 896 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 BBS7Q8IWZ6 715 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 EMC1Q8N766 993 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 RIN3Q8TB24 985 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 SLC39A13Q96H72 371 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 MCEEQ96PE7 176 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 THAP2Q9H0W7 228 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 ECT2Q9H8V3 914 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 SPTLC3Q9NUV7 552 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 COX16Q9P0S2 106 aa14.32□□□□□ -0.12
PTCH1-213ENST00000546820 AGO1Q9UL18 857 aaKnown RBP14.32□□□□□ -0.12
PTCH1-213ENST00000546820 HELZP42694 1942 aaKnown RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 TCRBV5S1A1TA0A578 114 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 MAN2B1O00754 1011 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 GREM1O60565 184 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ENDOD1O94919 500 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ADH1CP00326 375 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 KLKB1P03952 638 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 CYBBP04839 570 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 CYP1A2P05177 515 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 FECHP22830 423 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 RDXP35241 583 aaKnown RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 PTPN9P43378 593 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 RPL7AP62424 266 aaKnown RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ATP11AP98196 1134 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 PRKCQQ04759 706 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 SIGLEC14Q08ET2 396 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 CCDC14Q49A88 953 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 BRMS1LQ5PSV4 323 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ADGRF1Q5T601 910 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 ACBD5Q5T8D3 534 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 TRIM68Q6AZZ1 485 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 Q6ZNB5 142 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 STRADAQ7RTN6 431 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 DNAAF5Q86Y56 855 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 JOSD2Q8TAC2 188 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 WBP2Q969T9 261 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 MSANTD3Q96H12 275 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 BTN2A3PQ96KV6 586 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 FCRL2Q96LA5 508 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 CFAP57Q96MR6 1250 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 TBCBQ99426 244 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 CNPY3Q9BT09 278 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 IRX2Q9BZI1 471 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 GTSE1Q9NYZ3 720 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 INTUQ9ULD6 942 aa14.31□□□□□ -0.12
PTCH1-213ENST00000546820 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-213ENST00000546820 TMEM191CA6NGB0 347 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 KCNU1A8MYU2 1149 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
PTCH1-213ENST00000546820 ARNTLO00327 626 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 SCAMP3O14828 347 aaKnown RBP14.3□□□□□ -0.12
PTCH1-213ENST00000546820 ACSL4O60488 711 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 RNF8O76064 485 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 LCA5LO95447 670 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 GJB6O95452 261 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 TMEM253P0C7T8 217 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 ARSAP15289 507 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 MAGEA1P43355 309 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 CXCR3P49682 368 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-213ENST00000546820 GAD2Q05329 585 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 TNK2Q07912 1038 aa14.3□□□□□ -0.12
PTCH1-213ENST00000546820 EIF4EBP2Q13542 120 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms