RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 DCAF17Q5H9S7 520 aaPredicted RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 TOGARAM2Q6ZUX3 1019 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 CCDC186Q7Z3E2 898 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 BBS7Q8IWZ6 715 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 ZNF276Q8N554 614 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 DHTKD1Q96HY7 919 aaPredicted RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 KLF16Q9BXK1 252 aaPredicted RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 UBXN6Q9BZV1 441 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 METTL14Q9HCE5 456 aaKnown RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 ARHGEF4Q9NR80 690 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 SPHK2Q9NRA0 654 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 LSM7Q9UK45 103 aaKnown RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 GOLGA4Q13439 2230 aaKnown RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 ADAM23O75077 832 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 TBX18O95935 607 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 IRF1P10914 325 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 PLA2G4AP47712 749 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 PGFP49763 221 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 YWHAEP62258 255 aaKnown RBP17.03■□□□□ 0.32
DDX55-212ENST00000544738 CYP4F3Q08477 520 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 SLC4A11Q8NBS3 891 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
DDX55-212ENST00000544738 CDK5RAP1Q96SZ6 601 aaKnown RBP17.03■□□□□ 0.32
DDX55-212ENST00000544738 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX55-212ENST00000544738 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 DEC1Q9P2X7 70 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 DNMT3LQ9UJW3 386 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 NAGPAQ9UK23 515 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 USP3Q9Y6I4 520 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 PLXNB3Q9ULL4 1909 aa17.03■□□□□ 0.32
DDX55-212ENST00000544738 A0A1W2PQH9 124 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 RALAP11233 206 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 RARGP13631 454 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 PMS1P54277 932 aaKnown RBP17.02■□□□□ 0.32
DDX55-212ENST00000544738 RAD23BP54727 409 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 KDSRQ06136 332 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 ANO4Q32M45 955 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 CBWD6Q4V339 395 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 CBWD3Q5JTY5 395 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 CBWD5Q5RIA9 395 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 C10orf120Q5SQS8 335 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 ARHGAP17Q68EM7 881 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 C12orf40Q86WS4 652 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 MARCH9Q86YJ5 346 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 ETFBKMTQ8IXQ9 262 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 TRIML1Q8N9V2 468 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 SETD7Q8WTS6 366 aaKnown RBP17.02■□□□□ 0.32
DDX55-212ENST00000544738 SLC39A7Q92504 469 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 TATDN2Q93075 761 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 SLC35C1Q96A29 364 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 ARID3AQ99856 593 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 NMUR1Q9HB89 426 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 OSER1Q9NX31 292 aa17.02■□□□□ 0.32
DDX55-212ENST00000544738 KIAA1549LQ6ZVL6 1849 aa17.02■□□□□ 0.31
DDX55-212ENST00000544738 TRIM49BA6NDI0 452 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 GREM1O60565 184 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 TULP3O75386 442 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 GJB3O75712 270 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 TBXAS1P24557 533 aaPredicted RBP17.01■□□□□ 0.31
DDX55-212ENST00000544738 KIR2DL1P43626 348 aaPredicted RBP17.01■□□□□ 0.31
DDX55-212ENST00000544738 TMEM25Q86YD3 366 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 SLC41A1Q8IVJ1 513 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 ARHGAP18Q8N392 663 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 PHTF2Q8N3S3 785 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 ANKRD52Q8NB46 1076 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 ERLEC1Q96DZ1 483 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 HSPA12BQ96MM6 686 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 XPO6Q96QU8 1125 aaKnown RBP17.01■□□□□ 0.31
DDX55-212ENST00000544738 UBL7Q96S82 380 aaPredicted RBP17.01■□□□□ 0.31
DDX55-212ENST00000544738 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
DDX55-212ENST00000544738 TNRC6BQ9UPQ9 1833 aaKnown RBP17■□□□□ 0.31
DDX55-212ENST00000544738 TRABD2BA6NFA1 517 aa17■□□□□ 0.31
DDX55-212ENST00000544738 PMM2O15305 246 aa17■□□□□ 0.31
DDX55-212ENST00000544738 COG7P83436 770 aa17■□□□□ 0.31
DDX55-212ENST00000544738 CUL2Q13617 745 aa17■□□□□ 0.31
DDX55-212ENST00000544738 TENM4Q6N022 2769 aa17■□□□□ 0.31
DDX55-212ENST00000544738 FOXR2Q6PJQ5 311 aa17■□□□□ 0.31
DDX55-212ENST00000544738 TRMT11Q7Z4G4 463 aaKnown RBP17■□□□□ 0.31
DDX55-212ENST00000544738 SCD5Q86SK9 330 aa17■□□□□ 0.31
DDX55-212ENST00000544738 NAT16Q8N8M0 369 aa17■□□□□ 0.31
DDX55-212ENST00000544738 WBP2Q969T9 261 aa17■□□□□ 0.31
DDX55-212ENST00000544738 DCBLD2Q96PD2 775 aa17■□□□□ 0.31
DDX55-212ENST00000544738 BBS2Q9BXC9 721 aa17■□□□□ 0.31
DDX55-212ENST00000544738 CALCOCO1Q9P1Z2 691 aa17■□□□□ 0.31
DDX55-212ENST00000544738 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
DDX55-212ENST00000544738 ZNF510Q9Y2H8 683 aa17■□□□□ 0.31
DDX55-212ENST00000544738 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
DDX55-212ENST00000544738 IGHV1OR15-9A0A0B4J2B8 117 aa16.99■□□□□ 0.31
DDX55-212ENST00000544738 BICDL2A1A5D9 508 aa16.99■□□□□ 0.31
DDX55-212ENST00000544738 GOLGA8CPA6NN73 597 aa16.99■□□□□ 0.31
DDX55-212ENST00000544738 CYSRT1A8MQ03 144 aa16.99■□□□□ 0.31
DDX55-212ENST00000544738 ZBTB24O43167 697 aaPredicted RBP16.99■□□□□ 0.31
DDX55-212ENST00000544738 CHRM1P11229 460 aaPredicted RBP16.99■□□□□ 0.31
DDX55-212ENST00000544738 GABRG2P18507 467 aa16.99■□□□□ 0.31
DDX55-212ENST00000544738 MAOBP27338 520 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms