RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ZBED8Q8IZ13 594 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 CRIPAKQ8N1N5 446 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 FAM76AQ8TAV0 307 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 TEKT4Q8WW24 435 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 RNF34Q969K3 372 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 CNGB3Q9NQW8 809 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 ARHGEF4Q9NR80 690 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 WBP1LQ9NX94 342 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 DTLQ9NZJ0 730 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 USP3Q9Y6I4 520 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 FNDC1Q4ZHG4 1894 aaPredicted RBP14.19□□□□□ -0.14
HCFC2-202ENST00000544223 MYO16Q9Y6X6 1858 aa14.19□□□□□ -0.14
HCFC2-202ENST00000544223 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 ALDH2P05091 517 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 MAGOHP61326 146 aaKnown RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 LRRC26Q2I0M4 334 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 RNF19BQ6ZMZ0 732 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 STRADAQ7RTN6 431 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 SCD5Q86SK9 330 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 RNF139Q8WU17 664 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 ATP6V1G3Q96LB4 118 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 WDR83Q9BRX9 315 aaKnown RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 DNAI2Q9GZS0 605 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 TKTL2Q9H0I9 626 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 DSEQ9UL01 958 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 A0A1W2PQH9 124 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 INPPL1O15357 1258 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 GALTP07902 379 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 CPB1P15086 417 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 CREB1P16220 341 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 DEFB103AP81534 67 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 OLIG2Q13516 323 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 SYDE1Q6ZW31 735 aaPredicted RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 MDM1Q8TC05 714 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 GIPC2Q8TF65 315 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 PRCCQ92733 491 aaPredicted RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 CASP10Q92851 521 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 SEPT5Q99719 369 aaPredicted RBP14.18□□□□□ -0.14
HCFC2-202ENST00000544223 COLEC11Q9BWP8 271 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 PCDH9Q9HC56 1237 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 TMEM39AQ9NV64 488 aa14.18□□□□□ -0.14
HCFC2-202ENST00000544223 GOLGA8KD6RF30 607 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 VNN2O95498 520 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 VAV1P15498 845 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 CSF2RAP15509 400 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 ADRA1BP35368 520 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 PDIA2Q13087 525 aaKnown RBP14.17□□□□□ -0.14
HCFC2-202ENST00000544223 TFDP2Q14188 446 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 FUT10Q6P4F1 479 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
HCFC2-202ENST00000544223 DQX1Q8TE96 717 aaKnown RBP14.17□□□□□ -0.14
HCFC2-202ENST00000544223 AUTS2Q8WXX7 1259 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 ZNF670Q9BS34 389 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 ZCWPW1Q9H0M4 648 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 RAB6BQ9NRW1 208 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 STAP1Q9ULZ2 295 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 EFR3BQ9Y2G0 817 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 OAZ2O95190 189 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 DESP17661 470 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 GRIA1P42261 906 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 MAGEA4P43358 317 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 LMNB2Q03252 620 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 DUSP4Q13115 394 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 EFTUD2Q15029 972 aaKnown RBP eCLIP14.17□□□□□ -0.14
HCFC2-202ENST00000544223 BNIPLQ7Z465 357 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 NPAS4Q8IUM7 802 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 IGDCC3Q8IVU1 814 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 NPWQ8N729 165 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 TTC13Q8NBP0 860 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 CCNYQ8ND76 341 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 CELF6Q96J87 481 aaKnown RBP14.17□□□□□ -0.14
HCFC2-202ENST00000544223 VN1R3Q9BXE9 311 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 MICAL3Q7RTP6 2002 aa14.17□□□□□ -0.14
HCFC2-202ENST00000544223 KCNK1O00180 336 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 METTL18O95568 372 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 CAPN2P17655 700 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 TYMPP19971 482 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 YWHAGP61981 247 aaKnown RBP eCLIP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 GABPB1Q06547 395 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 AP1B1Q10567 949 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 SF3A3Q12874 501 aaKnown RBP eCLIP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 ANKRD33Q7Z3H0 272 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 CYP4X1Q8N118 509 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 AGGF1Q8N302 714 aaeCLIP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 WDCPQ9H6R7 721 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 MAGED2Q9UNF1 606 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 CDY1Q9Y6F8 540 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 EEF2KO00418 725 aaKnown RBP14.16□□□□□ -0.14
HCFC2-202ENST00000544223 FBXO21O94952 628 aa14.16□□□□□ -0.14
HCFC2-202ENST00000544223 TTC4O95801 387 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms